Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00991 ATGGTTGGACCAAACTTCATGGATGAGTTAGACTGCGGCAGCTTCTTTGACCAAATCGATGACCTCCTTGATTTCCCCGTCGACGACGTTGATACTGCTAACGCCTCCTTGCCGTCCGTCGCCTCCGCCGGAAACTGCAACTCGCTTGCGAGTATCTGGCCTTCTGAGTCCCACTCATTTCCTGCCTCCGACTCGGTGTTTTCCGGCAATAGTGCCTCGGACCTCTCGGCGGAGCTCTCCGTTCCGTATGAAGACATTGTTCAATTGGAGTGGCTATCGAATTTTGTGGAGGACTCATTTTCTGAGGGGAGTCTCACAATGAAGAAAATTGAGCAGCAGCCATCATCATGTGCTACAAAGGAGGACTCTGTGCATAACCAATTCCAGACATCAAGTCCAGTTTCTGTCCTTGAAAGCAGCAGTTCCTCCTCTGGTGGAAAGACGACCGGGATTTACATCCCTGTGCCTTGTGGACGTGCACGCACCAAGCGTCCACGTCCCGCGACATTCAACCCTCGTTCGGCCATGCAGCTCATTTCCCCTACTTCCTCCTTTGTAGGGGAGAATATGCAGCCTAATGTTATCTCCACCAAGGCATCTTTAGAGTTCGAAAACGTTGTTGAGTCTCAAATTGTGGGCAAGAAACCAAAGCTTGCTTCTGGAGAGTCAAAGAAGAAAAAGAAAATGAAGATGCCACTTCCTGCAGCTCCAGCTGACAGCAATCAGGATGCTTCACAACCTATTAGGAAATGCATGCATTGTGAGATAACCAAGACACCACAATGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCTTGTGGTGTTCGCTACAAGTCGGGCCGACTTTTCCCCGAATACCGGCCTGCTGCTAGTCCAACATTTTGTCCATCGTTGCACTCCAATTCGCACAAGAAGGTCCTTGAAATGAGATGCAAGGATATCGAGAACTCCGGTTTCGAATCCCATTCAGCTGCATCACCTGAACTCATTCCAAACACTAACAACATTCTCACCTTGGAATACATGTGA 1038 0.4952 MVGPNFMDELDCGSFFDQIDDLLDFPVDDVDTANASLPSVASAGNCNSLASIWPSESHSFPASDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFSEGSLTMKKIEQQPSSCATKEDSVHNQFQTSSPVSVLESSSSSSGGKTTGIYIPVPCGRARTKRPRPATFNPRSAMQLISPTSSFVGENMQPNVISTKASLEFENVVESQIVGKKPKLASGESKKKKKMKMPLPAAPADSNQDASQPIRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSLHSNSHKKVLEMRCKDIENSGFESHSAASPELIPNTNNILTLEYM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00991 345 MobiDBLite consensus disorder prediction 119 149 - -
Car04g00991 345 Pfam GATA zinc finger 251 284 IPR000679 GO:0006355|GO:0043565
Car04g00991 345 MobiDBLite consensus disorder prediction 119 171 - -
Car04g00991 345 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 249 308 - -
Car04g00991 345 CDD ZnF_GATA 250 297 IPR000679 GO:0006355|GO:0043565
Car04g00991 345 PIRSF Txn_fac_GATA_plant 3 338 IPR016679 GO:0003677|GO:0005634|GO:0045893
Car04g00991 345 SMART GATA_3 245 295 IPR000679 GO:0006355|GO:0043565
Car04g00991 345 PANTHER GATA TRANSCRIPTION FACTOR 1 345 - -
Car04g00991 345 ProSitePatterns GATA-type zinc finger domain. 251 276 IPR000679 GO:0006355|GO:0043565
Car04g00991 345 Gene3D - 246 295 IPR013088 GO:0006355|GO:0008270
Car04g00991 345 PANTHER GATA TRANSCRIPTION FACTOR 8 1 345 - -
Car04g00991 345 MobiDBLite consensus disorder prediction 217 246 - -
Car04g00991 345 ProSiteProfiles GATA-type zinc finger domain profile. 245 281 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00991 Car-Chr4 9989074 9991234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00991 10 319 C2C2-Gata Transcription Factor Family AT1G08010 37.421 1.10e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car04g00991 GATA 5.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00991 - - gmx:100816641 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00991 04 9989074 9991234 Car04g00991 04 9989074 9991234 ECH