Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00986 ATGGGAAGTAAATGGAAGAAAGCAAAAGTTGCTCTTGGTCTTAATCTCTGCATGTTCGTTCCAAGAACCTTAGACGACGATTTTCCGCCTTCCACGCTCGTTTCCGAGAGGCTTTCCGACGCCGCTCTTCTCTCGCCGGCGAACTGGGAGAAGGGTTCTTCTCGCCCAACTACGCCGGTTTCTTCTTTTCACGGTTTGAGACTCTCCAAAAGTAGTAGCAAATCGTCCAAGCAAACATGCGCAATATGTTTAGCCAAAATGAAGCAAGGATCTGGCCAAGCTATATTCACTGCAGAATGTTCACATTCCTTCCATTTCCACTGTATTGCTTCAAACGTAAAACATGGGAACCAAGTATGTCCGGTGTGCCGAGCAAAGTGGAAGGAAATACCGTTGTCGGGTTCCAGCTTGGATCCTATCCAAGGCACAGTAACACCAAGTCCAATAAATTGGCCCCAAAATGATGCTTTGATGGCTGTGGTCCACCGCCTACCTCTGCCTCATCCTCGCCGGGATCTGAATAGGCGGCATATTGTGCCACTTTATCAGGCTTCTGAGCCAGGCATATTCGATGATGATGAAACATTGAATCATGAACATGCAATTTCCAAGAGAAGTACTTGCAGTAAGAGTACTGAAGATATTAACGCCGTTCGAGCCATGGAGATTAAAATGTACCCGGAAGTGTCTTCCGCTCGAAGGTCCAATACTTATTCTAGCTTCACAGTTTTGGTTCATCTCAAAGCTACAGCTGCAGTAGCTGCTGCCGCCAAAAAACAAAACCTTAGCAGAAACCAAGCTAGCTTGACACCGATTTCGCAGACTCCGCGTGCTCCTGTTGACTTGGTCACTGTGCTTGACATCAGCGGTAGCATGGCGGGAACTAAGCTTGCACTGCTAAAAAGGGCTATGGGATTTGTTATACAGAATCTAGGCTCCAATGACCGGCTTTCTGTTATTGCTTTCTCTTCCACAGCTCGCCGCCTCTTTCCACTGTGTAGAATGACTGATTCGGGGCGACAGCTGGCACTGCAAGCTGTTAATTCTTTGGTTGCAAGTGGGGGTACCAATATTGCCGAAGGTCTGAGAAAAGGTGCTAAGATCATGGAAGACCGAAAAGAAAAGAATCCAGTTGCGAACATTATTCTTTTGTCAGATGGGCAGGATAATTACACTGTTGGTGGCTCTGGAACCGACCAGCCTCAACCAAATTACCATTTGCTTCTGCCTACTTCCGTCAGTGGTCGCGATAATTCAGGATTTCAAATTcctgtgcatgcttttggatttggtgcagaccatgatgcttcatcaatgcactcaatttcggagatctccggcggcacattttcattcatcgaaactgaagctgtgttacaggatgcatttgcacaatgcattggaggactccttagtgttgttattcaagagttgcaAGTGGCAATTGAGTGTGTACACCAGGATCTCAGTCTTGTTTCACTCAAAGCAGGAAGTTACCCGAGCCGTTTGATGGCTGATGGGCGCAAAGGATTTATCGATGTTGGGGACTTGTATGCTGACGAAGAGAGGGATTTTCTAGTTTCAGTTAATGTTCCAGCTACGTCTAGTAACGAAACATCGTTGATAAAGGTCAAATGTGTTTACAAGGATCCCTTGACTCAGGAGACGGCATCATTGGAAAGTGATGTAGTGAAGATCCAGAGGCCTGAAATAGCTGTGGAGGTTGTAATGTCTCTTGAAGTGGACAGACAATACAATAGGCTTCAAGCAGCAGAGGCGATGGCACAGGCACGAACCGCAGCTGAAAATGGAGATCTAACTGGAGCAGTATTAATCCTTGAAAATTGTCGGAAGATGCTTTCAGAGACTGTATCCGCTAAATCTCACGACCGTCTTTGTGTTGCATTGGATGCTGAGCTCAAGGAAATGCAAGAGCGGATGGCAAGTAGGCATGTCTATGAAGCATCTGGGAGAGCATATATACTCTCCGGTTTGAGTTCACACTCGTGGCAAAGAGCAACCGCAAGAGGCGATTCCACCGATAGTTCAAGTCTTGTTCAAGCATATCAGACACCATCAATGGCCGAGATGCTTACTCGATCTCAGGCTATGTTACTAGGTAGTCCATCGGGTCAGAGGCTTCTACAGCCGCTTTTGTCATACCGATCACAACCAAGCCCAAGAGGGCAGTTATGTCATTTTGATGATGGTTTTGATTCAGCAAATGCCTGTGAATTTCAAGGCTTTCCATCAAACTCTCTCTGCTCTGGCATGTTGGGCAATAGTAAGATAACTGATCATAGAGCGTGTTTGTTTCCACGTCGAAAGCTTACTGAACTGCTTCGGTACCATGTTGTAAATACAAGCTTGAGACCAGCCATGAAAATGCAGATCCAAACATATCTCTAG 2409 0.4301 MGSKWKKAKVALGLNLCMFVPRTLDDDFPPSTLVSERLSDAALLSPANWEKGSSRPTTPVSSFHGLRLSKSSSKSSKQTCAICLAKMKQGSGQAIFTAECSHSFHFHCIASNVKHGNQVCPVCRAKWKEIPLSGSSLDPIQGTVTPSPINWPQNDALMAVVHRLPLPHPRRDLNRRHIVPLYQASEPGIFDDDETLNHEHAISKRSTCSKSTEDINAVRAMEIKMYPEVSSARRSNTYSSFTVLVHLKATAAVAAAAKKQNLSRNQASLTPISQTPRAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLCRMTDSGRQLALQAVNSLVASGGTNIAEGLRKGAKIMEDRKEKNPVANIILLSDGQDNYTVGGSGTDQPQPNYHLLLPTSVSGRDNSGFQIPVHAFGFGADHDASSMHSISEISGGTFSFIETEAVLQDAFAQCIGGLLSVVIQELQVAIECVHQDLSLVSLKAGSYPSRLMADGRKGFIDVGDLYADEERDFLVSVNVPATSSNETSLIKVKCVYKDPLTQETASLESDVVKIQRPEIAVEVVMSLEVDRQYNRLQAAEAMAQARTAAENGDLTGAVLILENCRKMLSETVSAKSHDRLCVALDAELKEMQERMASRHVYEASGRAYILSGLSSHSWQRATARGDSTDSSSLVQAYQTPSMAEMLTRSQAMLLGSPSGQRLLQPLLSYRSQPSPRGQLCHFDDGFDSANACEFQGFPSNSLCSGMLGNSKITDHRACLFPRRKLTELLRYHVVNTSLRPAMKMQIQTYL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00986 802 Pfam RING-like zinc finger 80 109 IPR001841 -
Car04g00986 802 CDD vWA_C3HC4_type 280 454 - -
Car04g00986 802 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 716 - -
Car04g00986 802 SMART VWA_4 279 466 IPR002035 -
Car04g00986 802 SMART ring_2 80 123 IPR001841 -
Car04g00986 802 ProSiteProfiles VWFA domain profile. 281 467 IPR002035 -
Car04g00986 802 Gene3D von Willebrand factor, type A domain 281 468 IPR036465 -
Car04g00986 802 CDD RING-H2 80 124 - -
Car04g00986 802 Coils Coil 626 646 - -
Car04g00986 802 SUPERFAMILY RING/U-box 76 130 - -
Car04g00986 802 SUPERFAMILY vWA-like 276 467 IPR036465 -
Car04g00986 802 Pfam VWA / Hh protein intein-like 630 702 IPR032838 -
Car04g00986 802 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 131 IPR013083 -
Car04g00986 802 ProSiteProfiles Zinc finger RING-type profile. 80 124 IPR001841 -
Car04g00986 802 Pfam von Willebrand factor type A domain 281 464 IPR002035 -
Car04g00986 802 PANTHER OS10G0464500 PROTEIN 3 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00986 Car-Chr4 9916356 9920640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00986 69 124 C3H Transcription Factor Family AT1G57730 42.857 4.14e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00986 - - gmx:100818239 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00986 04 9916356 9920640 Car04g00986 04 9916356 9920640 ECH