Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00984 ATGGACATCACAATTATATCAAAAGAAACAATAAAACCATCATTGCCAACACCAAATGAACACAAATTCTTCAAACTCTGTCTTTTTGATCAGCTTCAATTGATCACCTATTTACCAATGGTTTTGTTTTACCCCAAAAAAGAAGGCCACTCAGAAATCTCCCACATCATTACTCAATTAAAAAAATCACTTTCTGAAACACTAACAATTTTCTACCCTGTAGCAGGAAGAAGAAAAGATCACACCTTTATCACTTGTAATGATGAAGGTGCTGTTTTCTTGGAAGCCAAGGTAAACCATACCATGGTTGAATTTCTAACACCACCTAAGCTAGAATATCTGAATAAATTGCTTCCATGTGAGCCTAATAAAATGCATTCATATGATGAAGATTTACCACAAGTACTTGTTCAAGTTAACATTTTTAATTGTGGTGGAATAGCTATAGGTACTTGTAATTTACATACACTCCTTGATGGTTGTTCAGGCAGCCTCTTCCAAACAACTTGGACCGCCATTTGTCGCGGTTGTAACGATGATTTACCGCGGCCTGATTTATTTTCAGCCTCTTCTTTCTTTCCACCATTAAATAATTTGAATTTGCATGACCATGTTGGTAAGAAAAAAAATAATGAGGTCTTAGATGGACAAAAGAAATGTAGCACAAGAAGATTTTTGTTTGGTTTAGAATCCATCAACATTCTAAGATATAAAGCAAAAGAGGATGATGAAAGTTTTAAGTTTCCTACAAGATATGAAGCATTGGCTGCTTTTATTTGGAAACACATGACACTTGCATGCAAGATGGAAGAATTTGAAGATATCAAAAGACCATCTTTGGCTATGCATATTCTTGACATGAGGAGAAGGATGGGTGAGCCTTTTTCTAGATACACTATAGGAAACATTTTGTGGCCAGTGATGGTGTTTTGTGAAACAATTGATGAAGAAACTGATATTAAGTATTTGGTTAAAATTTGTAAGGAGAAATTTGGGAAAATTTCAAGGGAATTGTTTGTAAGAGTGAAGAATGGTCCAAGTATGTTAGGGAGCAATGAATGTGTGGATTTGCCTCAAGGTGTGGAAAATAGAAGTCCAATTCCAGTTGTTTTGACAAGTTGGTGTGGTTTGAATTTTAGTGAGCTTGATTTTGGTTGGGGGAAGCCTTTGTGGGGTGGTGTTAGAGGTGGTGATCAAGAAACTCTTCCTAATGTGGCTGTTATTATGGAAACTCATCAAGGCATGGAAGCTTGGTTCACAATGGAAATACAACATATAGCTAATTTGGAAAATGATATTGAGTTTCTTAGATTTGCTTTGCCTAACCCCTCTGTTTCAAACatttacttataa 1353 0.3548 MDITIISKETIKPSLPTPNEHKFFKLCLFDQLQLITYLPMVLFYPKKEGHSEISHIITQLKKSLSETLTIFYPVAGRRKDHTFITCNDEGAVFLEAKVNHTMVEFLTPPKLEYLNKLLPCEPNKMHSYDEDLPQVLVQVNIFNCGGIAIGTCNLHTLLDGCSGSLFQTTWTAICRGCNDDLPRPDLFSASSFFPPLNNLNLHDHVGKKKNNEVLDGQKKCSTRRFLFGLESINILRYKAKEDDESFKFPTRYEALAAFIWKHMTLACKMEEFEDIKRPSLAMHILDMRRRMGEPFSRYTIGNILWPVMVFCETIDEETDIKYLVKICKEKFGKISRELFVRVKNGPSMLGSNECVDLPQGVENRSPIPVVLTSWCGLNFSELDFGWGKPLWGGVRGGDQETLPNVAVIMETHQGMEAWFTMEIQHIANLENDIEFLRFALPNPSVSNIYL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00984 450 Gene3D - 217 437 IPR023213 -
Car04g00984 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 443 - -
Car04g00984 450 Pfam Transferase family 1 435 - -
Car04g00984 450 Gene3D - 1 205 IPR023213 -
Car04g00984 450 PANTHER F21J9.9 6 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00984 Car-Chr4 9892123 9893475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00984 60 430 Monolignol Biosynthesis Gene Families AT5G48930 24.041 2.39e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00984 - K13065 gmx:102668997 708.753