Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00981 ATGTGCAAGTCTAAAAAGAGCACCACCGTGGTGCAAGTGCAACCCACAAACAGAAACCCTCGACGATCTTTAACATCTTCGTCATCGTCGAATTTTCCATCCTCTACCAGCGATGTTCCGATCACAGAATCAAGAAGCTACGTATACGGAGATAAACATAATAAACAATGCTCCAAAACATCATCTTCCTCTTCCATTTCTAGCCACGCTTCTCTTTCAAGTCTCAAACATACCCTTCCTGAAAACCCTCATATCTACCCCTTCTCTGAGATTTCCATCGCCACCGCTAATTTTTCCACCAACCGCCTCTCAAACTCATCCTTCCGTTGTTCCCTCCGCGATCTTGACGTCGTCGTTTTTCAACGCAAATTCCGCCGTCACATGGACCTGCCGGAGCTTCGTGATCGACTCGCTCTTATCTGCCGGAGCCACCATAGCAGCCTCGTAAAACTCCTCGGAGCTTCCGTCTCCGGTAATTACATTTACCTTGTTTATGACTTTGTCCACGGTGCTAACCTTTCCGATTGCCTTCGCAATCGTCGGAACCCTAGCTTCACCAATCTCTCCACGTGGACCTCACGGATGCAGGTTGCCTCCGATCTCGCACACGGCCTTGATTACGTTCACAATTCCTCTGGTTCCAGTTCCGGTTTCGTTCATAACCATATCAAGAGCTCCAGCATCATCGTTGCCGATAATACTCTCAGGGCTAAGATATGCCACTTCGGGACGTCGGAGCTCTGCGGCGAGCCCGTCGACCTTTCTTCTGGAATGGACTCCGGCAGGAAATTGAGGAAGTCCGGTAGTCGGACGGTGAGGTTTGAAGGGACGAGGGGGTACATGGCGCCGGAATTTCAGGTAACCGGCGTGGCGACGCAGAAGACGGACGTGTACGCGTTCGGCGTGGTGGTACTTGAAATTCTGAGCGGAGAAGAAGCGGTGAGATTTGAATTGGAAGGTGATGATGGTAGGTACAGGAGGGTGAGTGTGGTGGAGACGGCGAGGGAATCGTTGAAGGATCAGGGTGGCGTGAGAAAGTGGGTGGATAGGAGGCTGAGGGATTCGTTTCCGACGGATGTGGCTGAGAAAATGATTCGGGTCGGGTTGGAGTGTGTTGAGGATGATCCGAAAGAAAGACCTGATATGGGTCGGGTTTTGATGGAAGTGTCCAAGTTGTTTTTGGAATCTAAGGAGTGGGACGAAAAATTAGGAACAAACGTTGATTTATCGGTCTCCTTGGCCCCACGGTGA 1251 0.5068 MCKSKKSTTVVQVQPTNRNPRRSLTSSSSSNFPSSTSDVPITESRSYVYGDKHNKQCSKTSSSSSISSHASLSSLKHTLPENPHIYPFSEISIATANFSTNRLSNSSFRCSLRDLDVVVFQRKFRRHMDLPELRDRLALICRSHHSSLVKLLGASVSGNYIYLVYDFVHGANLSDCLRNRRNPSFTNLSTWTSRMQVASDLAHGLDYVHNSSGSSSGFVHNHIKSSSIIVADNTLRAKICHFGTSELCGEPVDLSSGMDSGRKLRKSGSRTVRFEGTRGYMAPEFQVTGVATQKTDVYAFGVVVLEILSGEEAVRFELEGDDGRYRRVSVVETARESLKDQGGVRKWVDRRLRDSFPTDVAEKMIRVGLECVEDDPKERPDMGRVLMEVSKLFLESKEWDEKLGTNVDLSVSLAPR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00981 416 MobiDBLite consensus disorder prediction 1 40 - -
Car04g00981 416 Gene3D Transferase(Phosphotransferase) domain 1 169 409 - -
Car04g00981 416 ProSiteProfiles Protein kinase domain profile. 97 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00981 416 PANTHER OS09G0572100 PROTEIN 1 416 - -
Car04g00981 416 Pfam Protein tyrosine and serine/threonine kinase 126 386 IPR001245 GO:0004672|GO:0006468
Car04g00981 416 PANTHER OS09G0572100 PROTEIN 1 416 - -
Car04g00981 416 SUPERFAMILY Protein kinase-like (PK-like) 120 390 IPR011009 -
Car04g00981 416 Gene3D Phosphorylase Kinase; domain 1 55 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00981 Car-Chr4 9859599 9861198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00981 81 406 Receptor kinase-like Gene Family AT1G51940 32.845 1.25e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car04g00981 PK_Tyr_Ser-Thr 1.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00981 - - mtr:MTR_1g094730 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00981 04 9859599 9861198 Car04g00981 04 9859599 9861198 ECH