Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00977 ATGATGACGGCGCATAACATGGATCCTGATGTTGTTCGATGGGGTCTTCATCTTCTAGATGTTTGTACTTTTTCTCATGGTCGTACCCCTAGTGTTGAAACTCGATGTGATCCCGATTTAAGTCGAGTTGAATATGTTAGGGAAGGCTTCTGTCAACCTTTGTATGTTGAGGGTGACGAGGCTCTTGCACGTGCATATCAAGACGAGTTGTCACAGCTTGATTCCATGGGGGCTGGTGGGACGAAGGATTTTGAGAATGAGCAAGTGCAGGCATCTGTTAATTCGCGAGACTGGCTTTCGTCTTCTAATGGGAGCTATAACTTTGATAATCAACATGTAGGCAATGAATCTTTCCAGAACCCCGTAGGTGAGTCATGTGATACGAAAGGAGTGCAGGATTGTGGTCCAAGTGGAAGGGAAAACGATGCGCATGAAGTTGGAGTATTTAGTTCTTCTAATGGGTCAGGAGAGATACCTGCCACTAGTGATGACATGTGGTGTCCATTGGAAATATCGGATGAGTCTTCTCTTGACGGTGAAGTAGGCAAAAGATTCAATCAGATGGTTCCCGTTCCTCATGTTCCTAAAATCAACGAAAAAATACCATCTGATGACGAAGAAATATCAGACCATCAAAGGCTGCTTGACAGACTGCGGTTATATCAACTGGTCGAGTCTAAGGTTAAAGGAGATGGTAACTGCCAGTTTCGTTCTTTGTCAGATCAACTCTATCGCTCTCCAGACCTCCACGCTTTTGTACGGGAACAAATTCTTAAACAGCTCAAGTCCTACCCAGAAAAATATATGAATTATGTTCCTATGGATTATAGTAAATATTTAATGGATATGAGCAGGAGTGGTGAATGGGGCGATCATGTCACGTTGCAGGCTGCTGCAGATTGGTATGGTGTCAAAATATTTGTGATTACATCTTACAAGGACACATGTTACATTGAGATTCTACCGGAGACACAGAGGTCTGAAAGAGTAATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATTTATCCGGAAGAAGAAATGCTTCCATCTTGTGCAAAGAAAAAGAAAAAATGGTGGAATTTCGGCAGTTAG 1101 0.4269 MMTAHNMDPDVVRWGLHLLDVCTFSHGRTPSVETRCDPDLSRVEYVREGFCQPLYVEGDEALARAYQDELSQLDSMGAGGTKDFENEQVQASVNSRDWLSSSNGSYNFDNQHVGNESFQNPVGESCDTKGVQDCGPSGRENDAHEVGVFSSSNGSGEIPATSDDMWCPLEISDESSLDGEVGKRFNQMVPVPHVPKINEKIPSDDEEISDHQRLLDRLRLYQLVESKVKGDGNCQFRSLSDQLYRSPDLHAFVREQILKQLKSYPEKYMNYVPMDYSKYLMDMSRSGEWGDHVTLQAAADWYGVKIFVITSYKDTCYIEILPETQRSERVIFLSFWAEVHYNSIYPEEEMLPSCAKKKKKWWNFGS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00977 366 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 27 364 - -
Car04g00977 366 ProSiteProfiles OTU domain profile. 223 347 IPR003323 -
Car04g00977 366 Gene3D - 205 352 - -
Car04g00977 366 Pfam OTU-like cysteine protease 229 315 IPR003323 -
Car04g00977 366 MobiDBLite consensus disorder prediction 128 163 - -
Car04g00977 366 PANTHER OTU DOMAIN CONTAINING PROTEIN 27 364 - -
Car04g00977 366 SUPERFAMILY Cysteine proteinases 210 347 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00977 Car-Chr4 9829511 9835557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00977 - - gmx:100820379 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00977 04 9829511 9835557 Car04g01878 04 20326888 20331205 ECH
Car04g01878 04 20326888 20331205 Car04g00977 04 9829511 9835557 ECH
Car04g00977 04 9829511 9835557 Car04g00977 04 9829511 9835557 ECH
Car02g00510 02 5983618 5989595 Car04g00977 04 9829511 9835557 PCT