Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00975 ATGAATAACTCAGTTTCAGAGAACAGTTTTATAATTGAAAGTGATGaagaagatgagaaagattttaacaaaggtgatgatggaaatgattctgattcttcaaattcctcaaatgaAAACCCTCCACAGAGGAAACTCAGTTCTTACAACCCTTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTACCATCACCAAACATTGGATTTCTAGGAACTTCTTCATTTTCAAAATTAAGCAGTTCCTTCCTTTCCACGTCTCTAACAAGGAGGTACACTCCTGAAGCACTTCCTTCAGTTACAAAACCTCTGATACAACCAACAGAAGAAGAGCAGCAACAAAGACACAGCTCCCACGCCTTGCTTCTCCCTCCTAGAAAGTCTTCTTTGCTAAAGAAAGATTCCAAGGTTTCTCATGAAGTTCCTTCTCGCCACTGCACTTTCGGACAGGCTGTCCTTAATGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCTACCCCTTATGCTGCTAAAGAAGGTGGATGGGCTGGACTTTCCATTTTGTTCATTTTTGGAATTATTTCCTTTTATACCGGGTTGCTCTTGCGTTCCTGCTTGGACAGTGAACCTGGCCTTGAAACATACCCTGACATTGGCCAAGCTGCTTTTGGCACCGCTGGACGTATTGCCATTTCGATAATATTGTACGTCGAATTATATGGATGTTGCATTGAATATATTATTTTGGAAGGAGACAACTTGGCTTCCTTGTTTCCAAATGCATACTTAAATTTAGGTGGAATTGAATTGAATCCACAAACACTGTTTGCTGTGATTGCCACATTGGCTGTTCTTCCTACAGTTTGGCTCCGTGACCTTAGAGTTCTTAGTTACATCTCAGCTGGTGGAGTTATTGCATCAGTTTTAGTGATTCTGTGCTTGTTCTGGATCGGCGTAGACGACGTTGGCTTTCAACGTTCAGGAACAACAGTCAATCTTGCAACTCTTCCTGTTGCTATTGGTCTTTATGGTTACTGTTATTCTGGACATGCTGTGTTCCCAAACATTTATACATCCATGGCAAAGCCAAATCAATTCCCTGCAGTACTTGTAGCATGTTTTGGAATTTGTTCCTTACTATATGCTGGAGGTGCTATTATGGGATACAAAATGTTTGGCGAAGATACCCTCTCTCAATTTACTCTTAACCTGCCTCAAGACTTGGTTGCAACAAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTAGAAGAGTTGATACCATCAAACCATGCCAAGTCTTACCTATTTTCCATTTTCATCAGAACAGGCCTTGTATTTTCTACCTTGGTTATTGGTCTCTCAGTTCCCTTTTTCGGTTTGGTGATGTCCTTGATTGGATCTTTACTTACAATGCTTGTAACTTTGATATTACCGTGTGTTTGTTACCTAAGAATCTTGCGGGGAAAAGTTACGCGATTACAGACAGGACTTTGCATTACAGTTATTATAGTAGGTGTTGTGTGTTCTTCAGTCGGAACGTACTCAGCGCTTGCCGAGATTGTTAAGAGTTTGAGTGGATGA 1620 0.3938 MNNSVSENSFIIESDEEDEKDFNKGDDGNDSDSSNSSNENPPQRKLSSYNPSWPQSYRQSIDLYSSVPSPNIGFLGTSSFSKLSSSFLSTSLTRRYTPEALPSVTKPLIQPTEEEQQQRHSSHALLLPPRKSSLLKKDSKVSHEVPSRHCTFGQAVLNGINVLCGVGILSTPYAAKEGGWAGLSILFIFGIISFYTGLLLRSCLDSEPGLETYPDIGQAAFGTAGRIAISIILYVELYGCCIEYIILEGDNLASLFPNAYLNLGGIELNPQTLFAVIATLAVLPTVWLRDLRVLSYISAGGVIASVLVILCLFWIGVDDVGFQRSGTTVNLATLPVAIGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLVACFGICSLLYAGGAIMGYKMFGEDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLFSIFIRTGLVFSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCYLRILRGKVTRLQTGLCITVIIVGVVCSSVGTYSALAEIVKSLSG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00975 539 MobiDBLite consensus disorder prediction 29 52 - -
Car04g00975 539 Pfam Transmembrane amino acid transporter protein 151 528 IPR013057 -
Car04g00975 539 MobiDBLite consensus disorder prediction 1 52 - -
Car04g00975 539 PANTHER AMINO ACID TRANSPORTER AVT1B 26 536 - -
Car04g00975 539 PANTHER OS05G0424000 PROTEIN-RELATED 26 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00975 Car-Chr4 9812790 9818183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00975 1 472 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.393 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00975 K15015 - gmx:100775840 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00975 04 9812790 9818183 Car04g02356 04 37862529 37879377 ECH
Car04g00975 04 9812790 9818183 Car04g00975 04 9812790 9818183 ECH