Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00958 ATGAGTGGTGAATGTGGTGGAAACACTATTGCTACCTCTACTACCCCATTAAATTGGTGGTATCTCCAAACAAATTCTCTTTCTTCTAATTGGAACGATGTTAAACATGCATGGAACAACAACCAAATGAATCCTAATTCTTCCTCTTCTTGTGAGGATCAAGATATTTCTGTTTCTTCTACATCTTTCACTAATGCTTCCAACCATTCAACCCTCACGGTTGAATCTTCTCGACGAGTATTCGTTGATCAACCTCATGCACCTTCCTCTAATGATTTCATGGCTCAACATGCTTCAGATAATCAACTTTGGAGTCATGTTCTATCAGGTGTTGGAACAAATGGAGAGTTGCACAACAACCAAGAAATTGGAGAGAACTTTTTGGATGCACTTTCATCTAAAACAATGTTTGAACCAGCTTGTGACTATTTGAAGAAACTTGATACAAGTTGGGAATATAGTAATCCAACTTCATTCAATAGTAATTTTGAGAAGCACTTAAATGGGTACAGTGAAGCACTTATTGAGAATAATGAAAGGTTGACAAAATTATCCAATCTTGTAAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGCCAATTTGATCCACAAACAAACAACATGTCTAATAATTTGAATTCTTCTTCCATGAATCATCACTTTTCACAATCTAACCCTAGTTGTCTTTTCAAACCACCTTTTGATGATTCCACATCATGTACTATTGTTGATCAAGGAGTAGGTAATAAAAATTCAGGATCAATACTTTTTCCTAATATTTGCCATGATGATGATCATGACATGAAGGTTAAACAAGAATTTAATCATCACCATGCAAGTGAAGTTATGCATGGACATGTGTTTGGAAAATCATTTAATCCAAATGGATATCTTGATGGATTTAACAATAGTGTTAATTCAGTTGGAGAAAGTGGAAAATTTTATCAAGGGTTGTCTAATAATATTTCACCATGTACAAAAAATTTCTCAGATGTTATATCATTTAATAGTAGGTTTGGAAGGCCAGTTATTGGAATCCATGCACAAAGGCCAAACATTAAATATTCATCAAACTTATCAGAATCAAAGAAGCAGAGCCTTCACTCATCATCACATATGAGAAATAGTAATGGAAGAGGAGAGGGGACAACACGTGAAATAAAGAAGAAAAGATCTGAAGAATCATCAGAGGCAAGTTTGAAGAAGACTAAACAAGATACATCAACAACTAATTCTTCTTCAAAGGTGCAGGCACCAAAAGTCAAGCTAGGAGAAAAGATCACAGCCCTTCAACAAATTGTGTCTCCTTTTGGAAAGACAGATACAGCATCTGTTCTGTTTGAAGCAATTGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGGATCCAAGGGGAATAAGCTGTTTTGATAGAAAAGATCATAAGGAGGATGGAAAAATGGACCTTAGGAGCAGAGGACTTTGTTTAGTTCCAACTTCATGTACTCCTCTTGTATACAGAGAGAATAGTACTGGACCAGATTACTGGACACCAGCTTATAGAGGTTGTTTGTATAGGTGA 1569 0.3607 MSGECGGNTIATSTTPLNWWYLQTNSLSSNWNDVKHAWNNNQMNPNSSSSCEDQDISVSSTSFTNASNHSTLTVESSRRVFVDQPHAPSSNDFMAQHASDNQLWSHVLSGVGTNGELHNNQEIGENFLDALSSKTMFEPACDYLKKLDTSWEYSNPTSFNSNFEKHLNGYSEALIENNERLTKLSNLVSTWSIAPPDPEVSSQFDPQTNNMSNNLNSSSMNHHFSQSNPSCLFKPPFDDSTSCTIVDQGVGNKNSGSILFPNICHDDDHDMKVKQEFNHHHASEVMHGHVFGKSFNPNGYLDGFNNSVNSVGESGKFYQGLSNNISPCTKNFSDVISFNSRFGRPVIGIHAQRPNIKYSSNLSESKKQSLHSSSHMRNSNGRGEGTTREIKKKRSEESSEASLKKTKQDTSTTNSSSKVQAPKVKLGEKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQDPRGISCFDRKDHKEDGKMDLRSRGLCLVPTSCTPLVYRENSTGPDYWTPAYRGCLYR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00958 522 CDD bHLH_AtbHLH_like 425 464 IPR045239 -
Car04g00958 522 PANTHER TRANSCRIPTION FACTOR BHLH111 32 507 - -
Car04g00958 522 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 425 465 IPR036638 GO:0046983
Car04g00958 522 MobiDBLite consensus disorder prediction 382 404 - -
Car04g00958 522 MobiDBLite consensus disorder prediction 358 381 - -
Car04g00958 522 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 410 459 IPR011598 GO:0046983
Car04g00958 522 MobiDBLite consensus disorder prediction 405 421 - -
Car04g00958 522 MobiDBLite consensus disorder prediction 358 422 - -
Car04g00958 522 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00958 Car-Chr4 9595968 9600193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00958 329 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 42.640 1.55e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00958 - - cam:101498929 1040.41