Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00957 ATGGCTAGGATCAAACCTCAGGCTCTGTTACAGCAAAGCAAAAGGAAGAAGGGACCTTCTCGTGTTAGCGCCACAACTATTATATTTTACGCTTTGATTCTTGTCTTGATTGGTTTTTTCCTTTTGGCTACATACAGACATTGGTCCAACAGGTCAAGATTACAATCAGAAGATCACTTGTCAGTCTCTGAGGGTGAAAATAGTTTTGTTGACTCGAAGAAATCGGAGCTACCTGGATATGCTGTTTTAAATACCTCTAAAGGGTCTATAATCGTAGAACTGTACAAGGACAGTGCTCCTGAAGCTGTTGATGAATTTATTGATTTGTGTCAAAAAGGGCACTTCAAAGGGATGCTTTTTCAGCGCGTAATTAAGCACTATGTGATTCAGGCAGGGGATGGCCAAGGAACAGGAGCAGCTGATTGGAACTTAAGAGGAAAGCAACCTACAAGTATGAAGCATGAAGCATTCATGCTCGGAACATCCAAGGGCAAACACACCAACAAAGTATTTGATCTTTTCATTACAACTGCACCCATACCAGATCTAAATGAGAAGCTTATTGTGTTTGGGCAAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATCGAAGAAGTGGATACCGATGAACATTACACTCCTAAAATATCTATTGGTATACTTGATGTGACTCTCGAACAGAAGATCTGA 690 0.4087 MARIKPQALLQQSKRKKGPSRVSATTIIFYALILVLIGFFLLATYRHWSNRSRLQSEDHLSVSEGENSFVDSKKSELPGYAVLNTSKGSIIVELYKDSAPEAVDEFIDLCQKGHFKGMLFQRVIKHYVIQAGDGQGTGAADWNLRGKQPTSMKHEAFMLGTSKGKHTNKVFDLFITTAPIPDLNEKLIVFGQVIKGEDVVQEIEEVDTDEHYTPKISIGILDVTLEQKI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00957 229 SUPERFAMILY Cyclophilin-like 78 225 IPR029000 -
Car04g00957 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 223 IPR002130 GO:0000413|GO:0003755
Car04g00957 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 225 IPR002130 GO:0000413|GO:0003755
Car04g00957 229 Gene3D - 66 229 IPR029000 -
Car04g00957 229 CDD cyclophilin 82 222 - -
Car04g00957 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 229 - -
Car04g00957 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Car04g00957 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Car04g00957 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Car04g00957 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00957 Car-Chr4 9575469 9581592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00957 79 225 U-box Gene Family AT5G67530 32.468 4.21e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00957 - - gmx:100781538 401.749