Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00951 ATGATGCCCCCTGAGCAAGAAACTAATACTAATATTAATGCACCAAATATCTCTCCAATCACAAACAGAACAGAGAGTAGTTCCATCCATGGCGAGGCAGAAGGTTCTTTTTCTAATAAAGTCAAACCAAGTTTGGATGATCATAACGCCATTCCTTCACGCACAACTACAGTACCACTAACATCATTTTCTATTCTTCCTCAATCTTTGCGTCCCGTTACCCTCAAATTTGAAGATGTTTCGTACAGCATAACGCTCACAAACCAAAAGAATAAGGGTTGCGTTTTGGGAAAAGAGCCAAAGGTAACAAGGAAAGTACTAAACGGAGTCACCGGAATAGCTAAACCCGGCGAGTTAACGGCAATGCTAGGTCCCTCAGGGAGCGGAAAAACAACTCTACTAACCGCCCTTGCTGGAAGACTAACCGGAAAAGTCTCCGGCACAATAACATACAACGGAAACTCAGACTCAAGCTGCATGAAACGTAAAATAGGGTTTGTTTCTCAAGACGACGTCGTTTACCCTCACCTAACGGTTTTGGAAACGCTAACCTACACTGCTCTGTTAAGGCTTCCGAAAACTCTTACACGAGAAGAGAAAGTGGAACACGCGGAGAGGATAATCACGGAGCTTGGCCTTACACGGTGTCGAAACAGTCCCGTCGGAGGGTGTTTAGGTCTTTTCCGGGGAATCTCCGGTGGGGAGAGGAAACGGATGAGTATTGGACAGGAGATGTTGGTGAACCCGAGTTTGTTGTTTTTGGATGAACCCACTTCCGGTTTGGACTCGACCACGGCTCAACTCATTGTTTCGGTTCTTAGGAGACTTGCCCGGTCCGGTCGAACCGTTGTGACTACTATTCATCAGCCCTCGAGCCGGTTGTATAGGATGTTTGATAAAGTGGTGGTTCTTTCTGATGGGTACCCGATATATAGTGGTGATGCGGGTCGGGTCATGGATTATCTTGGATTCGTTGGGTTTGTTCCGGGTTATAACTTTGTTAACCCTGCTGATTTTCTCCTTGACCTTGCAAATGGCATAGTTGCTGACGTGCAACATGATGATGAGATAGAGCACCATGATCAAGATCAAGCTTCAGTTAAACAGTCACTAATTTCATCCTATAAGAAAATCTTATACTCTGCTCTTAAAGATGATATTCAGCACACTAATACTGAACCATCGGTTTTTCCATCAGGAGGAACTCCTAAACGTTGTTCTGATAACCAATGGAACACTAGCTGGTGGGAGCAATTCAAGGTTCTGCTTAAAAGGGGTCTAAGAGAGAGGAGGCATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTCTTATCTGTATCCATTCTCTCGGGACTCCTCTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTTCTATTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTATTCAATGCAATCTTTGCATTTCCATTAGAAAGGCCAATGCTAACAAAAGAAAGATCATCAGGAATGTACCATCTCTCCTCCTACTATGTTGCTAGAATGGTGGGAGACTTACCAATGGAGCTTGTTCTTCCAACTATTTTTGTAACCATCACCTACTGGATGGGTGGTCTCAAACCTTCCCTCATTACATTTGTCTTAACCCTTTTAATCATGCTTTTCAATGTTCTAGTCTCTCAAGGAATAGGCCTAGCACTCGGTGCGATTCTCATGGATGTTAAGCAAGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTGTTAGCTGGTGGTTACTACATTCAAAAAATGCCTTCTTTTATAGCATGGTTAAAATATATTTCTTTCAGTCACTACTGTTATAAGTTGCTGGTGGGGGTGCAGTACTCAGTAAGTGAGGTGTATGAGTGTAGACAAGGGTTGCATTGTAGGGTAAGAGATTTTCCAGCTATAAAGTGTTTGGAGATTGATAATATGTGGGTTGATGTGGCTGCATTGACTATAATGTTTATTGGATTCAGAGTTGTGGCTTATCTAGCTTTAAGGATGGGTCAGCTTCACTGA 2046 0.4326 MMPPEQETNTNINAPNISPITNRTESSSIHGEAEGSFSNKVKPSLDDHNAIPSRTTTVPLTSFSILPQSLRPVTLKFEDVSYSITLTNQKNKGCVLGKEPKVTRKVLNGVTGIAKPGELTAMLGPSGSGKTTLLTALAGRLTGKVSGTITYNGNSDSSCMKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTREEKVEHAERIITELGLTRCRNSPVGGCLGLFRGISGGERKRMSIGQEMLVNPSLLFLDEPTSGLDSTTAQLIVSVLRRLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGDAGRVMDYLGFVGFVPGYNFVNPADFLLDLANGIVADVQHDDEIEHHDQDQASVKQSLISSYKKILYSALKDDIQHTNTEPSVFPSGGTPKRCSDNQWNTSWWEQFKVLLKRGLRERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLTKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLITFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYISFSHYCYKLLVGVQYSVSEVYECRQGLHCRVRDFPAIKCLEIDNMWVDVAALTIMFIGFRVVAYLALRMGQLH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00951 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 54 678 - -
Car04g00951 681 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Car04g00951 681 SMART AAA_5 116 309 IPR003593 -
Car04g00951 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 331 IPR003439 GO:0005524
Car04g00951 681 Pfam ABC-2 type transporter 288 352 IPR043926 GO:0140359
Car04g00951 681 CDD ABCG_EPDR 72 313 - -
Car04g00951 681 MobiDBLite consensus disorder prediction 1 53 - -
Car04g00951 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 327 IPR027417 -
Car04g00951 681 Pfam ABC transporter 108 259 IPR003439 GO:0005524
Car04g00951 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 54 678 - -
Car04g00951 681 Gene3D - 76 323 IPR027417 -
Car04g00951 681 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524
Car04g00951 681 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00951 Car-Chr4 9537482 9541525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00951 105 307 Calmodulin-binding Proteins AT2G36910 30.516 1.88e-14 75.5