Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00935 ATGTTTTCTACCCTCACAATGCAGCGTTTCAAAATGGGTTTCTCTGACTATATCCAAGCATTAGAAGAAGAACGCCGTAAGATTCAGGTCTTTCCTAAAGAACTTCCCCTTTCCTTAGAACTCGTCACACAAGctattgAAGCTTGTAGACAACAATTGAATTTGTCTGGAACAACAAGTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGAAGGACCTGTTTTGGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCACCTTATTGTGAACAAGTGTatgatgatgatgaagaagaagatgatgaACAGCATTCTCATCATAAGCAGCAAAAGATTTCATCAAATGATAATAATAAGAACAGTGATAAGAGGAAATCTGATTGGCTTAGATCTGTTCAGTTATGGAATCCAGATCCTTCATCTGAGGAGGTTGTTACTAGGAAAGTGCCTGCGTTGGAATTGAAGAGAAGTGGAACTTGTGGTGGTGCTTTTCAACCATTCCAAAAAGAAGAAAAAGTTAACAACAAAGGGGAATCGTTGAGTAAAGGACAAGGACAACAACAACCTTCTCCGATCGGTGTAGCTGCCGCGAGTTCTAATGCTGTTACTGTCACCAGTAACAATGCTGGAAGCTGCAAAAGAGAGGATAAAGATGGACAGAGAAAGCAACGGCGGTGTTGGTCGCAGGAGTTGCACAAACGCTTCTTGCAGGCACTTCAACAACTTGGAGGTGCAGATACTGCCACACCAAAGCAAATCAGAGAACTAATGAATGTTGATGGCCTTACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGTTTACACACAAGAAGACCAAGTTCATCAGTTAATGAAAGTGCCAATTCGCATACAGCAGCACCATTTGTCCTTGTAGGAAACATTTTTGTCCAACCTGCAGAATATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAGTTGGTGGCACCTTCTGGAATCTATGCACCAGTGGCCACACATCCTCCACAAGTTTCTTCAATTAAGAAGCCAGAGTTTAAGAAAGTAGAGTTGTTTGAACACTCAATATCAGAAGAAAGGACTAATCATAGTGAAGGCGTTGTTCATTCAAACTCATCACCTACCTCATCATCCTctacacatactattactaccactactactTCACCTGGCTTTTGA 1212 0.3886 MFSTLTMQRFKMGFSDYIQALEEERRKIQVFPKELPLSLELVTQAIEACRQQLNLSGTTSEYNLNGQSECSEQTTSTEGPVLEEFIPIKKRASPYCEQVYDDDEEEDDEQHSHHKQQKISSNDNNKNSDKRKSDWLRSVQLWNPDPSSEEVVTRKVPALELKRSGTCGGAFQPFQKEEKVNNKGESLSKGQGQQQPSPIGVAAASSNAVTVTSNNAGSCKREDKDGQRKQRRCWSQELHKRFLQALQQLGGADTATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSSSVNESANSHTAAPFVLVGNIFVQPAEYGGVASSTTTGEMTKLVAPSGIYAPVATHPPQVSSIKKPEFKKVELFEHSISEERTNHSEGVVHSNSSPTSSSSTHTITTTTTSPGF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00935 403 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 6 397 - -
Car04g00935 403 MobiDBLite consensus disorder prediction 377 403 - -
Car04g00935 403 MobiDBLite consensus disorder prediction 368 403 - -
Car04g00935 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 286 IPR017930 -
Car04g00935 403 MobiDBLite consensus disorder prediction 108 132 - -
Car04g00935 403 Pfam Myb-like DNA-binding domain 231 282 IPR001005 -
Car04g00935 403 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Car04g00935 403 MobiDBLite consensus disorder prediction 100 132 - -
Car04g00935 403 Gene3D - 228 286 - -
Car04g00935 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 397 IPR044787 GO:0003700|GO:0006355
Car04g00935 403 MobiDBLite consensus disorder prediction 164 199 - -
Car04g00935 403 MobiDBLite consensus disorder prediction 185 199 - -
Car04g00935 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 229 284 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00935 Car-Chr4 9288679 9291124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00935 16 344 G2-like Transcription Factor Family AT1G68670 47.093 2.72e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g00935 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00935 - - aprc:113872943 519.235