Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00911 ATGGACGTGCCGAAACCCCGCCCCACACCAACTACGTCTCTAAGAGACGCCTCTGACTCCTCTACTGGTAGCTGGGACGCCATCGAATGGACCAAAATTGAGCCAATTCCGCGTTTCGCCTCTCACGCGAATCTCGATTTCTTGCTCGAGGAAGAGCAAGTTTTCGCCGAAGGACACGGTGTTGTTCTTGTTAATACAGATGATGCAGGCGTGTTGATCGTAACAAACTTTCGTGTAATATTTCTGAGTGAGGGAACTAGAAAAGTTATTGCTCTTGGAACAATACCACTAGCAACCATTGAGAAGTTTAACAAGATAGCTGTAAAGGTTCAGTCAAATACTCGTCAATTAGACAAGACACCAACACAAAGACTGCTCCAGGTGATTGGAAAAGATATGAGAATTATAGTCTTTGGTTTTAGGCCTCGTACAAAACAGAGACGTGCGATATATGATGCACTACTTAAGTGTACGAAGCCAACAATATTATGGGATCTTTATGCTTTTACATCTGGGCCTTCCAGGTTTAAGAACACTTCTCCTTTGGTGCGCTTATTGGATGAGTATTTGCGACTTATTGGCAAAGATACTCACCACGCTTCAATGGACATGATTGAAAGTGGGTCTTTCACCTTGTCAAATGACTTATGGAGAATAAGTAGTGTGAATTCCAGTTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGACCATTAGTGATGATGAAGTGCTCCAGGCTTGCAAATTCCGTGCTAGATGCCGGCTGCCTGTAATTTCATGGTGTCATCCTGATACTGGCGCAGTTCTTGCACGTTCCGCCCAACCTTTAGTTGGTCTCATGATGAATATAAGGAGCATCACGGATGAAAAACTTGTGGCTGCACTTTGCAGCAACCTTGATGGCTCAAGGAGAAAGCTATATATTGCTGATGCGAGACCAAGGAAAAATGCAATAGCTAATGGAGCCTTGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTTGGAATAGACAACATCCATGGAATGAGAGAGAGCTTTGTTCGGCTTCGAGAGTACATGGACAATCATGGCAGAACATCATCAGATGGAATGTCCTCATTTTTGAGACATGGTGGTGGGTCGATATGGGGTGGTGGCAATTTAAGTAGTATGTCTGCTTCGGTTACAACCCTTGGGGACAGTGGATGGTTATCGCATGTTCAGAATGTCTTGGCTGGTGGAGCTTGGATTGCTTCTCGTGTTGCTATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGATGGGATAGGACAAGCCAGTTAATTTCACTCGCTAATTTGTTGCTTGATCCGTATTATCGGACATTCAGAGGGTTTCAGGCACTTGTTGAAAAAGACTGGTTAGCATTTGGTCATCCATTTTCTGATCGTGTGGGAACACCATCTGTCTCTGGAAGTGGCAACGTATCTTTCGAGTTATCTAGGCAGTCTTCAACTGGCATCGCATCGCCACCCATGCGCCAGTCATCAGGAACAATCCCACCTCAACCTTCAGTTTCATCTCAGGCGCATAACTCAAACAACCACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTGTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAATTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGTTTTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAGAAGGAGAGGCTGCAGTGCAGTGTGTTTGAAACTTGTGGATGTTTGTGGGCATACTTGGCTGATATGCGGGCATCAGAAGGAGGTTCTCATGCGCATTGTAATCCCTTTTATGATCCACTGAAGTATAGCAGTCCTCTTCTGCCCCCAGCAGCAGCGTTAGCCCCAACTTTATGGCCCCAATTCCACCTTCGTTGGGCCTGCCCAGAAGAAGCACAAAGTGGGGAGGTTGAAGCACAATGTAGGAAGATAATTCTGAAAAACTTTGAGATACAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCTCAAGAAACTACAAGTGCCATGGAATTGTTGAATGCTGAATTGCGACGTGAGAAGGTGTTAAACATCTCAGCTACGAACAAAGCCAAGAGGATAACCAAAGAGAATACAGACATAAAGCGTGCAATTCAGTCAATTGGGTGCAAGATTCACTTTTCTAGTAGTGGTGATTGCATTGTTGACATTGAAAACAACCCAGCGGATGCAGTTCCAAACTTGCGTTGTTCCTCTAGGCAAGGGTCAAGTACTGCTGTGATTAATGACAAAACGGATCTATCTGTTTCTGTAACAGAAGACGACGACGATGATGGAAACAATGTTATTGGTCGAATATGTGAAACTCTATGCCCATTTCGCACTGGAGATGGAGGCTGCAGATGGCCAAATGGTGGTTGTGCTCAACTAGGTAGTCAGTTTGTTGGGTTTAAGGCAAATTTCGATGCATTTGACCGACTCTCGATTGATGACAGTTATTTCAAGCCTTAG 2535 0.4418 MDVPKPRPTPTTSLRDASDSSTGSWDAIEWTKIEPIPRFASHANLDFLLEEEQVFAEGHGVVLVNTDDAGVLIVTNFRVIFLSEGTRKVIALGTIPLATIEKFNKIAVKVQSNTRQLDKTPTQRLLQVIGKDMRIIVFGFRPRTKQRRAIYDALLKCTKPTILWDLYAFTSGPSRFKNTSPLVRLLDEYLRLIGKDTHHASMDMIESGSFTLSNDLWRISSVNSSYTMCQSYPFALVVPKTISDDEVLQACKFRARCRLPVISWCHPDTGAVLARSAQPLVGLMMNIRSITDEKLVAALCSNLDGSRRKLYIADARPRKNAIANGALGGGSESSSNYFQSEIVFFGIDNIHGMRESFVRLREYMDNHGRTSSDGMSSFLRHGGGSIWGGGNLSSMSASVTTLGDSGWLSHVQNVLAGGAWIASRVAMEKASVLVHCSDGWDRTSQLISLANLLLDPYYRTFRGFQALVEKDWLAFGHPFSDRVGTPSVSGSGNVSFELSRQSSTGIASPPMRQSSGTIPPQPSVSSQAHNSNNHSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFLDCMFSSRFGNFFFNSEKERLQCSVFETCGCLWAYLADMRASEGGSHAHCNPFYDPLKYSSPLLPPAAALAPTLWPQFHLRWACPEEAQSGEVEAQCRKIILKNFEIQKAKEVAERKAQETTSAMELLNAELRREKVLNISATNKAKRITKENTDIKRAIQSIGCKIHFSSSGDCIVDIENNPADAVPNLRCSSRQGSSTAVINDKTDLSVSVTEDDDDDGNNVIGRICETLCPFRTGDGGCRWPNGGCAQLGSQFVGFKANFDAFDRLSIDDSYFKP 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00911 844 CDD PTP-MTM-like 257 547 - -
Car04g00911 844 SMART gram2001c 37 107 IPR004182 -
Car04g00911 844 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 210 649 IPR029021 -
Car04g00911 844 Pfam Myotubularin-like phosphatase domain 167 586 IPR010569 -
Car04g00911 844 Coils Coil 677 697 - -
Car04g00911 844 ProSiteProfiles Myotubularin phosphatase domain. 194 645 IPR010569 -
Car04g00911 844 MobiDBLite consensus disorder prediction 503 530 - -
Car04g00911 844 Gene3D - 60 158 IPR011993 -
Car04g00911 844 PANTHER MYOTUBULARIN-RELATED 16 843 IPR030564 -
Car04g00911 844 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 16 843 - -
Car04g00911 844 SUPERFAMILY PH domain-like 48 170 - -
Car04g00911 844 ProSitePatterns Tyrosine specific protein phosphatases active site. 434 444 IPR016130 GO:0016311|GO:0016791
Car04g00911 844 MobiDBLite consensus disorder prediction 1 22 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00911 1 844 Protein tyrosine phosphatase (PTP) family AT3G10550 65.533 0.0 1133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00911 K18081 - gmx:100781842 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00911 04 8970300 8983481 Car04g00911 04 8970300 8983481 ECH