Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00901 ATGCAGGATAGCCAAATTACTGTGCTTCCGAATGCAGCATCGGACGACAAAGCCTGCACGTTTGTGGGAACGGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGGATTATAGCAAGAGAAATTCGATTTCCAGATTACTTTTCAGACGAAGCAAGAGACCTTATTGACCGGCTATTGGATTTAGAGCCCAGCAGGAGACCAGGTGCAGGATCTGACGGTTATGCTATTTTGAAAAGGCATCCCTTTTTCAAGGGGGTTGACTGGGATAACTTAAGGGCACAAACTCCTCCGAAACTTGCTTTGGAACCTGGGACTCAATCGCCTGCTTGTGATGATGTTCATGATTCATCGTGGAGTCCTTCTCACATTGGCGATGGTTCTGCAGCTTCTTCTAGACAGCCTGATGGCGCTACATCGTCTTTAGAGGGAACTGGTCACATAACCAGACTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAGCCAGGGGAATCTGTTCTTATGATCTCCATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAACTCATCCTTACCAACAAACCAAAGTTGATCTATGTGGACCCTTCAAAATTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAACGATTTAAGCATTCAAGTCACTAGTCCCTCTCATTTCAAGATATGCACACCAAAAAAGGTAATGTCTTTCGAGGATGCTAAGCAAAGAGCATCTCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGATGA 897 0.4281 MQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSDEARDLIDRLLDLEPSRRPGAGSDGYAILKRHPFFKGVDWDNLRAQTPPKLALEPGTQSPACDDVHDSSWSPSHIGDGSAASSRQPDGATSSLEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVMSFEDAKQRASQWKKAIEGLQNR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00901 298 Coils Coil 278 298 - -
Car04g00901 298 SUPERFAMILY PH domain-like 114 297 - -
Car04g00901 298 MobiDBLite consensus disorder prediction 147 180 - -
Car04g00901 298 SUPERFAMILY Protein kinase-like (PK-like) 16 145 IPR011009 -
Car04g00901 298 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 294 - -
Car04g00901 298 Gene3D Transferase(Phosphotransferase) domain 1 14 133 - -
Car04g00901 298 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 12 294 - -
Car04g00901 298 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00901 298 Pfam Protein kinase domain 15 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00901 298 MobiDBLite consensus disorder prediction 134 180 - -
Car04g00901 298 Pfam PH domain 195 297 IPR033931 -
Car04g00901 298 SMART serkin_6 3 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00901 298 Gene3D - 180 298 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00901 Car-Chr4 8821572 8825719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00901 1 298 AGC Kinase Gene Family AT3G10540 81.544 1.43e-178 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Car04g00901 Pkinase 6.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00901 K06276 - gmx:100788780 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00901 04 8821572 8825719 Car04g00901 04 8821572 8825719 ECH