Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00882 ATGCATTATTACCCCATGGCTTTCCCTATCCTATTCCTTCTCTTCATTGCCCTTCCATTTTCCACAGCGAAACTCAACGTAGACTACTACAAAACAACGTGTCCTAACTTCCAAAAAATCGTTAATGAAAACATTTACAACAAACAATCCGCAAGccccgcaactgcaccaggaatcctccgtctcttcttccacgattgcataacggacggatgcgatgcatccatcctgatctcatcaacggcctacaatccccacgcagaacgcgatgcggatctcaacctctccctctccggaGACGCATTCGACGTTATAGTTAAAATAAAAAACGAACTGGAACTAACATGTCCCGGCGTCGTTTCGTGTTCCGATATCGTGGCACAGTCGACGAGAGACCTTGTTAAAATGGTTGGTGGTCCTTATTATCCGGTGAGGTTAGGTAGAAAAGATAGTCTTGTTTCAGATGGTTCAAGAACTGAAGCAAATCTTCCTAAAACAGACATGAACATGGATGCTATCATAAGCAAATTTACAGCAAAAAATTTCACTGTTAAAGAAATGGTTGCATTAACTGGTGCACACACCATAGGTTTCACACATTGTAAAGAATTCAGCAACAGAATATTCAATTTCAGTAGTACATCTGAGATTGATCCTACAATGCACCCTAAATTGGCTGCAGGGTTAAGAGATGTTTGTAAAAATTACACTTCTGACCCTTCCATGGCTGCATTTAATGATGTTAGGTCACCAGGGAAATTTGATAATGCTTATTTTCAAAATGTGTTGAAGGGTTTGGGATTATTGACAACTGATTATCTTTTGGGTGTGGATCCAAGGACAAGGCCACTTGTGGAACTTTATGCTAAAGATGAACAAGCTTTTTTTAATGATTTTGCTAAGGCTATGGAGAAACTTTCTGTTTTTGGTGTCAAGACTGGTCAAAAGGGTGAAGTGAGGAGCAGGTGTGATCAATTTAATCATATTCCTGCTTAA 996 0.3273 MHYYPMAFPILFLLFIALPFSTAKLNVDYYKTTCPNFQKIVNENIYNKQSASPATAPGILRLFFHDCITDGCDASILISSTAYNPHAERDADLNLSLSGDAFDVIVKIKNELELTCPGVVSCSDIVAQSTRDLVKMVGGPYYPVRLGRKDSLVSDGSRTEANLPKTDMNMDAIISKFTAKNFTVKEMVALTGAHTIGFTHCKEFSNRIFNFSSTSEIDPTMHPKLAAGLRDVCKNYTSDPSMAAFNDVRSPGKFDNAYFQNVLKGLGLLTTDYLLGVDPRTRPLVELYAKDEQAFFNDFAKAMEKLSVFGVKTGQKGEVRSRCDQFNHIPA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00882 331 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 CDD secretory_peroxidase 24 326 IPR033905 GO:0004601|GO:0042744
Car04g00882 331 Gene3D - 28 327 - -
Car04g00882 331 ProSiteProfiles Plant heme peroxidase family profile. 24 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Car04g00882 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Car04g00882 331 Pfam Peroxidase 50 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 Gene3D Peroxidase, domain 2 164 306 - -
Car04g00882 331 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00882 331 PANTHER PEROXIDASE 41 10 329 - -
Car04g00882 331 PANTHER - 10 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00882 Car-Chr4 8632310 8633611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00882 8 329 Peroxidase AT5G47000 54.769 5.99e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00882 K00430 - gmx:100795676 527.709