Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00865 ATGTTTTCTAGGTTGATACAACATGAAGGAAGTGTTGTCTCTGAAGACATTCACAATCACCTTGCTGACCCTTGTCTTGTTCTTACTTCTGATCCTAAACCTCGCCTTCGTTGGACTACTGATCTTCACCAACGATTTGTTGATGCTGTCACCCAACTTGGGGGTGCAACTAAAGCGACACCAAAAGCAATCATGAGGACCATGAATGTCAAGGGTTTGACACTGTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAAGCTGGAAAAGATTCCGAAGAGGGATGCAAAGACGGAATGTCAGGTTCATATCTTCTAGAAAGCCCTGGTACTGAGCACTCATCTCCAAAGTTACCAGTTTCTGATGCAAACGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAGATGGAGGTACAAAGTAAGCTACATTTACTCGTCGAGGCAGAGAAGCACTTGCAAATTCGGCAAGATGCAGAACGGAGATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTGGCTGATCAATTTATTGGTGATACAATTACAGACACAGACATCCAAAAATTTGAAGAAGTACCAAGTAGCGAGATTGGTGGAATGCATGTTTCAGAAATACCATACATTCTACAGCCCCAAGGGGCTAACTGTTCCACAGAAAGTTGCCTAACATCACTTGAGAGTCTCAGAGGGTTGACACTAGAAGGATCACCTGGTGGGACAAAGAGGATGCTAGGCTTGGACTCAATGGTAGCACCTTTGTTTTGGACTGAAACTAACATCAGAACTCATGGAATCCATTTAGCCCAAGTGAATCCTGAAGGAATAACTAGGTATGGCATGTAG 858 0.4347 MFSRLIQHEGSVVSEDIHNHLADPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGATKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDSEEGCKDGMSGSYLLESPGTEHSSPKLPVSDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGDTITDTDIQKFEEVPSSEIGGMHVSEIPYILQPQGANCSTESCLTSLESLRGLTLEGSPGGTKRMLGLDSMVAPLFWTETNIRTHGIHLAQVNPEGITRYGM 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00865 285 Pfam MYB-CC type transfactor, LHEQLE motif 131 176 IPR025756 -
Car04g00865 285 SUPERFAMILY Homeodomain-like 33 88 IPR009057 -
Car04g00865 285 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 285 - -
Car04g00865 285 Pfam Myb-like DNA-binding domain 36 86 IPR001005 -
Car04g00865 285 MobiDBLite consensus disorder prediction 104 125 - -
Car04g00865 285 Gene3D - 32 90 - -
Car04g00865 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
Car04g00865 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 285 IPR044848 GO:0003700
Car04g00865 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00865 Car-Chr4 8484029 8488047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00865 1 230 G2-like Transcription Factor Family AT3G24120 43.893 6.53e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g00865 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00865 - - gmx:100779871 450.284