Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00860 ATGGGATTAGCGGTGGGTGGTGTTGATTTGCTCAGTGAAAAAGCAGCTATGATGAGAGAGTCTCTTCAAAAGAGCCAAACAATCACAGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCAACTCAGATTAGAACTCATGCTATTAGGAAAGCTCATGAGAATATTGATAAAACTTTGAAGGCTGCAGAGGTTATATTGTCTCAATTTGATCAATATCGTCAGGCAGAGGCAAAAGTACTTAAAGGGCCACATGAGGACCTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAGGCAACATTCAGTTTTTTGGCATTAAGAATGGTTTTAAAAATAGTGATGGTGTTGTCAGCCATGCCAATAGTTTGCTAACTAAAGCTATTTCTAAGCTACAGGACGAGTTTAATGAGCTATTATTATCTTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCGTCGGGATCACCTGGTCATGAGGGCGATCATAATGGCAAAAATCCTTCCAATCACCATTCTGAGTCTCACAACAATGGTGCTGACACTGTTGTATACACACCTCCCGCTCTTATTCCACCACGAATTTTGCCACTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGACCACAGTTGCTCAAAATATACAGTCTGCAAAAACTTGGAGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTACAATGGGAGATTTTGGAAGCCAAAATCGGAAACTGGATTCATTTCATGCGAATAGCAGTGAAGTTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCGCTCAGTGAACAGTGTTTTGCCGAGGTGACTACAAACAGTGTGTCTATGCTACTTAGCTTTGGAGAAGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTGTTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATCGAAACACTTTTTAAAGGCAAAGCTTGCACTGAAATAAGAGAAGCTGCTAAGGCTTTGACAAAACGACTTGCACAAACAGCCCAAGAGACCTTTGGTGATTTTGAAGAAGCGGTTGAAAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTTCATCCTTTGACTAGCTATGTTATTAACTATGTGAAGTTTTTGTTTGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTGGAAATGATTCTTCCCAGCTAGCAACTGTAACAATGCGAATAATGCAAGCTTTGCAAATTAATCTAGACGGTAAATCGAAGCAGTATAAAGACCCCGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTTCGGTCAGTTCGGAGGTCTGAAGCCAAGGATTTGCTTGGGGATGATTGGGTACAAAGACATAGGAGGATCGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAATGTTTATCTATTCAAGGACTTACCTCGTCtggtggtggaagtggtactgctggtggtgatggtggagctggaagcagtagtggtgCCTCAAGAGCACTTGTTAAAGACAGGTTTAAGACATTCAATGTTATGTTTGAGGAACTCCATCAGAAGCAATCACAATGGACAGTTCCAGACAGCGAATTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCTTATCGATCATTTGTGAAACGTTTTGGGAAAAAACATGAACGAAAACAAACGATAATTGAACTGCTAATGCTGTTGGGGTTGCATTTGGTGGTTGAATTGAAGGAATGA 1896 0.3977 MGLAVGGVDLLSEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHAIRKAHENIDKTLKAAEVILSQFDQYRQAEAKVLKGPHEDLENYLEAIDKLRGNIQFFGIKNGFKNSDGVVSHANSLLTKAISKLQDEFNELLLSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHNGKNPSNHHSESHNNGADTVVYTPPALIPPRILPLLHDLAQQMIEAGHRPQLLKIYSLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTEIREAAKALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGAGSSSGASRALVKDRFKTFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGKKHERKQTIIELLMLLGLHLVVELKE 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00860 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 608 IPR004140 GO:0000145|GO:0006887
Car04g00860 631 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 608 - -
Car04g00860 631 MobiDBLite consensus disorder prediction 165 204 - -
Car04g00860 631 Gene3D Exocyst complex component Exo70 75 617 - -
Car04g00860 631 Pfam Exo70 exocyst complex subunit 269 611 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g00860 631 Coils Coil 358 378 - -
Car04g00860 631 SUPERFAMILY Cullin repeat-like 77 607 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00860 Car-Chr4 8434472 8441744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00860 8 605 EXO70 exocyst subunit family AT5G03540 73.701 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00860 K07195 - gmx:100813987 1045.03