Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00856 ATGGAGTATCTCTTAGTTTTGGTTCTTGCATTTTCTACATTGTTATATGTTACTTCTGCATTGAACTTTGAGGGCTTGGTTCTGTTATCACTATTGAAGCATTGGACTTTTGTGCCTAATACCATAAACTCAACATGGAAACCCTCTGATTCCACTCCATGTTCATCATGGGAAGGAGTTGAATGTGATCATGCTTTCCATGTAATATCATTAGAACTAAGTAATTATTCAATTTTTGGTCAATTAGGACCTGAAATTGGAAATTTGGTTCACCTTGAAACCCTAGATTTGTCAATTAATGATCTATCAGGTGAAATTCCACTAGAATTAAGCAATTGTAGCAAGCTTCAGTACTTGGATATTTCATCAAACAATTTCAGTGGTGAAATTCCAAAATCCTTGTTTGAAATTAATCCCTTGGAAGAATTGTATCTCAATAATAATAGTTTGAGTGGTTCCATTCCTTCTAGTATTGGAAACCTCACTAAACTATTTTCACTAGATTTTGGGCATAATTTGTTGTCAGGTACAATTCCTATGTCCATTGGAAATTGTAGTAAATTGAGTTTTGTGGTTTTGGACTCAAATCAATTGGAGGGAATTCTTCCTGAGAGTTTAAACAATTTAATAGATCTTTCTGATTTAAGTCTCAATTCTAATAATCTTGGAGGTAGTATTCATTTGGGATTGAGAAATTGCAAAAAGTTGAATTATTTGAGTCTTTCATACAACGAATTTAGTGGCAGTATTCCATCAAGTTTAGGGAATTGCAGTGGTATAATAGAGTTCTATGCTGCTGATAATAATTTAAATGGAAGTATACCATCAACCTTTGGTCTCCTTCACAATCTTACTAAGCTAATAATTCCAAATAATCTTTTGTCTGGGAATATACCTCCACAAATTGGTAATTGCAAATCATTGGACATGTTGCATTTGTATACCAATGAACTTGAGGGAGAAATTCCTAGTGAATTGGGAAACTTGAGAAAATTGCGCGATATTCGATTGTACGAAAACTTTTTGGTAGGAGAAATTCCACTTAGCATATGGAAAATTCATAGCCTTGAGCATGTCCTTGTGTACAATAATAGTCTCTTGGGGGAGTTACCTATTGAGATGACAGAGCTTAAAAATCTAAAGAACATATCATTGTTTAGCAACCAATTCTCTGGAGTTATACCTCAAACCTTAGGAATTAATAGCAGTTTGGTGCAGTTGGACTTTATGTTTAACATGTTCACTGGTACATTACCACCAAATCTTTGTTTTGGAAAGCAATTAGTGAAGCTGAATATGGGTGGCAATCAGTTTAATGGAAGCATACCTTCTGATGTAGGAAGGTGTACAACTCTCACAAGGGTGAGACTTGAAGATAATAATTTTACCGGGCTTCCTGATTTTGAAACTAATCCGAATATATCGTACTTGAGCATCAGCAAGAACAATATCAATGGAACCATTCCACCAAGTTTGAGAAACTGCACAAATCTCTCTCTTCTAGATTTATCCATGAACAGCTTAACAGGTTTTGTACCCTTAGAGCTTGGAGACCTTTTGAATCTTCAGACTTTGAATCTCTCTCACAATAACTTGGAAGGTCCTTTGCCACATCAACTGTCAAAGTGTACCAAAATGAGTAGTTTTGATGTTGGATTCAATTCCCTTAATGGTTCGTTTCCATCGAGTTTGGGAAGCTGGACAACATTAAGAACTTTGAATCTCAGAGAGAATCGTTTTAGCGGTGGAATCCCAGCTTTCTTGCCAGAATTTGAAGAGCTCAATGAGTTACAACTTGGTGGAAATAGTTTTGGAGGAAATATTCCTAATTCAATTGGAGCATTGAGGAATTTGTTATATGGTTTAAATCTAAGTGCTAATGGACTAGTAGGTGAGCTTCCTAGTGAGATTGGAAAACTGAAGAGTCTGCTAAAACTGGATCTATCTTGGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAGCTTAGCTCATTAACTGAATTGGAAATTTCATACAATTCTTTTGAAGGACCTGTGTCACAACAGCTGATCAACTTACCAAATTCTTCTTCATCATTTTTAGGCAATCCTGGCCTGTGTGTTAGCCTTTCATTAACTGATGATTCGAATTTCACAAGAAGCGGCTCTTTAAGGCTATGTGAATCAAAAAGCCACAGTAAAGTTGCAATTGTGATGATAGCACTTGGATCCTCAACATTTGTCGTGATCTTGTTTGGACTAATTTATATATTTTTACTCAGAAAGTCTAAGCAGGAAGCTGTCATCTACAAGGAAAATGATTGTTCAGACCTTCTCAAGAAAGTGATGGAAGCTACAGAGAATCTAAATGATGAGTATATTATAGGCAGAGGAGCTGAAGGAGTTGTTTACAAGGCTGCAATAGGTCCAGACAAAATTTTGGCAGTGAAGAAGATTGTATTTGGCGAGAACGAAAGGAAACGCTTAAGCATAACGAGAGAAGTTGAAACTCTTTCAAAGATTAGGCATAGAAATTTGGTAAGACTAGAAGGTGTTTGGTTGAGAGAAAATTATGGTCTAATCTCATACAAATACATGCCAAATGGAAGCCTTTATGATGTTTTGCATGAGAAGAATCCGCCACAATCCTTAAAATGGAGTATGAGGAAGAAGATAGCTGTTGGAATTGCTCAAGGATTGGGTTATCTTCATTTTGATTGTGAACCTGTCATAATACATAGAGACATCAAAACAAGCAACATACTATTAGATTCTGAAATGGAGCCCCATGTTGCTGATTTTGGTCTTGCTAAGCTTTTGAATCAAACATCTAATTCTTCCTCAACACAGTCAATAGATGTTTCAGGCACACTTGGATATATTGCACCAGAAAATGCTTATACAACTACAAAGGGAAAGGAATCTGATGTATACAGTTACGGAGTAGTTTTGCTTGAATTGATATCAAGAAAGAAGGCATTAGATCCATCATTTATGGAAGGAATGGATATAGTTATTTGGGTAAGATCTTTGTGGGAGGAATCAGGAGTTGTTGATGAAATTGTTGATTCAGAACTTGCCAATGAAATTTCAAATTATAATGCTAATGTGATGAAAGAAGTAACCAATGTGCTTTTGGTGGCTTTGACATGTACAGAAACGGATCCACGTAAGAGATTTACAATGAGAGATGTTATCAAGCATCTGTAG 3192 0.3584 MEYLLVLVLAFSTLLYVTSALNFEGLVLLSLLKHWTFVPNTINSTWKPSDSTPCSSWEGVECDHAFHVISLELSNYSIFGQLGPEIGNLVHLETLDLSINDLSGEIPLELSNCSKLQYLDISSNNFSGEIPKSLFEINPLEELYLNNNSLSGSIPSSIGNLTKLFSLDFGHNLLSGTIPMSIGNCSKLSFVVLDSNQLEGILPESLNNLIDLSDLSLNSNNLGGSIHLGLRNCKKLNYLSLSYNEFSGSIPSSLGNCSGIIEFYAADNNLNGSIPSTFGLLHNLTKLIIPNNLLSGNIPPQIGNCKSLDMLHLYTNELEGEIPSELGNLRKLRDIRLYENFLVGEIPLSIWKIHSLEHVLVYNNSLLGELPIEMTELKNLKNISLFSNQFSGVIPQTLGINSSLVQLDFMFNMFTGTLPPNLCFGKQLVKLNMGGNQFNGSIPSDVGRCTTLTRVRLEDNNFTGLPDFETNPNISYLSISKNNINGTIPPSLRNCTNLSLLDLSMNSLTGFVPLELGDLLNLQTLNLSHNNLEGPLPHQLSKCTKMSSFDVGFNSLNGSFPSSLGSWTTLRTLNLRENRFSGGIPAFLPEFEELNELQLGGNSFGGNIPNSIGALRNLLYGLNLSANGLVGELPSEIGKLKSLLKLDLSWNNLTGSIQVLDELSSLTELEISYNSFEGPVSQQLINLPNSSSSFLGNPGLCVSLSLTDDSNFTRSGSLRLCESKSHSKVAIVMIALGSSTFVVILFGLIYIFLLRKSKQEAVIYKENDCSDLLKKVMEATENLNDEYIIGRGAEGVVYKAAIGPDKILAVKKIVFGENERKRLSITREVETLSKIRHRNLVRLEGVWLRENYGLISYKYMPNGSLYDVLHEKNPPQSLKWSMRKKIAVGIAQGLGYLHFDCEPVIIHRDIKTSNILLDSEMEPHVADFGLAKLLNQTSNSSSTQSIDVSGTLGYIAPENAYTTTKGKESDVYSYGVVLLELISRKKALDPSFMEGMDIVIWVRSLWEESGVVDEIVDSELANEISNYNANVMKEVTNVLLVALTCTETDPRKRFTMRDVIKHL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00856 1063 ProSiteProfiles Protein kinase domain profile. 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00856 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Car04g00856 1063 Gene3D Phosphorylase Kinase; domain 1 752 859 - -
Car04g00856 1063 Gene3D Ribonuclease Inhibitor 466 588 IPR032675 -
Car04g00856 1063 Pfam Protein kinase domain 786 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00856 1063 SUPERFAMILY RNI-like 311 672 - -
Car04g00856 1063 Gene3D Ribonuclease Inhibitor 21 171 IPR032675 -
Car04g00856 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 126 1062 - -
Car04g00856 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 134 - -
Car04g00856 1063 SUPERFAMILY L domain-like 53 366 - -
Car04g00856 1063 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Car04g00856 1063 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Car04g00856 1063 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 134 - -
Car04g00856 1063 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 126 1062 - -
Car04g00856 1063 SUPERFAMILY Protein kinase-like (PK-like) 773 1063 IPR011009 -
Car04g00856 1063 Pfam Leucine Rich repeat 641 655 IPR001611 GO:0005515
Car04g00856 1063 Gene3D Ribonuclease Inhibitor 280 450 IPR032675 -
Car04g00856 1063 PRINTS Leucine-rich repeat signature 498 511 - -
Car04g00856 1063 PRINTS Leucine-rich repeat signature 519 532 - -
Car04g00856 1063 SMART serkin_6 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00856 1063 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Car04g00856 1063 Gene3D Ribonuclease Inhibitor 589 708 IPR032675 -
Car04g00856 1063 Gene3D Ribonuclease Inhibitor 172 277 IPR032675 -
Car04g00856 1063 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00856 Car-Chr4 8399715 8403680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00856 4 1063 Receptor kinase-like Gene Family AT1G17750 48.842 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g00856 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00856 - - gmx:100817655 1461.43