Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00847 ATGAGTTCCACATCTAATAAGTTGAGCCAGGGTAGGAGGCTTCTTGCAAACAAATCAATGAATGAGGCCAATGCTAAAGGAGAAGTCTTGAAGGTTAATGGAAACACAATTTATGTGAAAAACTATGCACTTTCATTTGAAGAAGATAGCAGAGTTATTTCTGAAATCAAGAGTGATGATGAGAAGTTACAGTTAGTTATAAACAGAATCATAAAGCACTGTTTTGAACTATTGGAGATGAAAACACGTTCTGCAAATGTAGATTTCTTCAAAAAAATTGGTTCTGCCACAACAGGTGAACATAATATATGGTGGATTGGAGGCTTTCGTCCTTCACAACTTCTTCAGGTAATTCTGCCTAAACTTGAAGATGTGTGCAGCAAACAACAAATTAGTGATATTTTGAATCTTGGACAATCATGTGAACAAGCAGAACATGCTCTTGCACAAGGCATGGAAAGACTCCATCAAATCATTGATAAACGGTTTGAACAAAACTATGTAACTCAACAACTAAGCTTCTTCAAGCAGGCTGATTTTCTTCGCCAAGAATTCTTGCATCAATTTTGTCATCTCCTTACAATTTGTCAGCATGCTCAATTCATTGTTGCTCTCAAGGAACATCTGCATAACCCTCGGAGCTCACTTTGA 651 0.3702 MSSTSNKLSQGRRLLANKSMNEANAKGEVLKVNGNTIYVKNYALSFEEDSRVISEIKSDDEKLQLVINRIIKHCFELLEMKTRSANVDFFKKIGSATTGEHNIWWIGGFRPSQLLQVILPKLEDVCSKQQISDILNLGQSCEQAEHALAQGMERLHQIIDKRFEQNYVTQQLSFFKQADFLRQEFLHQFCHLLTICQHAQFIVALKEHLHNPRSSL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00847 216 ProSiteProfiles DOG1 domain profile. 35 216 IPR025422 GO:0006351|GO:0043565
Car04g00847 216 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 215 - -
Car04g00847 216 Pfam Seed dormancy control 58 119 IPR025422 GO:0006351|GO:0043565
Car04g00847 216 PANTHER TRANSCRIPTION FACTOR TGA9 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00847 Car-Chr4 8362443 8364444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00847 34 214 Calmodulin-binding Proteins AT5G65210 37.561 2.08e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00847 K14431 - mtr:MTR_1g090370 261.922