Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00827 ATGAATAATGAGGATCCTGGAATTTCAGGAAATCCATACAAAGGTACAGTGAATGTTGGGTTTAGTGACAGAACCCCTTCTGATAAAGATGATGAAGACAATATATGTCTACAGACTGGTGAAGAATTTTCTGCTGAGTTCTTACGCGATCGGGTTGCTTTAAGGAGATTTCCTGTTATAACCGAGGCAGAGCAGCGCATGCCAAACAGATTGGACTTCaatattaataataataacaacaattatCAGCTGTTCTACGAGGATCAAAAACATACCCTTGGGCTAGGGAGAATGGATTCTGATAGTAATTTGGATTTGTCAGAGATTGCTTTAGCTAGAGGCTATGTTGCTGAAGTTGACAACAGGGCTTATCATAATAATTTGAGCAGATACCAGTTTGAACACGGTGGTATGAGACAAGCATCGAGTGCATTTTCCAGACAATTATCAAGTAAGTTTTCCGACGGATGTGATCAACTTGCCTCAGGACTAAATTCGCCTTCCATTTATGCAGCTGAGTCTCCTCGTTCATGCCATCCTTATGGGTCGGTGTTCTCAGAAGGCTCCTTCTACAAGAAGATAAAGTTTCTATGTAGTTTTGGAGGTCGAATACTACCAAGGCCAAATGATGGGAAGCTCAGATATGTAGGTGGAGAGACACGAATTATATCAATCAGGAAGAACATCACACACGAGGAACTTACGAGGAAGACTTCTGATATTTGCAATCAAACCCACATTATCAAATACCAGCTTCCGGGAGAGGATCTCGATGCTCTTATTTCTGTTTGTTCTGACGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGCTCTCAAAGACTTAGGATTTTTCTCCTACCTTCAAATGAATCCGAGAGTCCAAGTTCTAATGAATCAAGAGTCAATCAGCCAAGTGACGCTGATTACCATTATGTTGTTGCTGTTAATGGTATGCTGGATCCAAGTCCACGAAAGAATCCTAGCGCACCAAGCTTGGTCAGCCATACAAGCCAGTTTGCAAATAACTCCGATTACAACAATCCACATTTCCACAGGGAATCATCGACATCTCTATTTGCTTCAGAGATAAAGGATTTCAGCCCAACATCTTCAAATTTGGCTGGCATAATGTCAAAACCAGGTCCATTTCTAACAGCACTGAATGTACCAGGCAGGTCATATAATCAAACGCCTCCATCTCCCATTTGTGTACATCCTAAAGATCCAAAAATTTCTAATGTGCAGTTATTTACGGATCATCAACCATATAATGTTGTTAATGAAAGCATGATCCCCTTTGTCATGGAAAAAAATCCACGCGACAACTCTTTGTATGTTGACAGTACCAGTTATGTTGATCCCATCGCATATTATAACAATCCTCCCCAAGGGCCTTCATGTGTGAACTACCATCCTAGTAATCAATATACATTGGAGTCCGAACAAATCAGGAAGTCTAATGCTGATTTCCATTTTCATAGACGAAACAATAGTAAAGAATTTGTCTCTCCTGCAATTTGTAATCAAACTGATATGATATTCGAGAGACCTTTAGTTAACAATGAAGGTTCATATCATTTTAACAAGATTCTCTCTCATCCTCATGATTCATCAAGTATATTCTCAGTGGCTGATGATAGGGATGTATCTCAGTACAGAATGTTACATGCACTTTCCGACTCAACACTTCTGGAGAATAGTGAGAACTACAGAGGTCACTTGCAATTTCCGCTTAATGTTGAGAGAGACAAATTGTCGTCACTAGAAACTTCAAGTTCTTTGGAAGAATGTTCAATACAGACAGGAGAGGTAAGTGACGGGAAAGACCGCACGGCTTTGCATCAAAACTTGTCCGCGTTTGGAATGACCGATAATTTCCAGAGATTGTCAGATATCCGTAAAGAGAACTTACAATGTGCAGATCAAAGCACTGATTGGTTTGATGAAAAAGTTGGAGCTATGCCACAACATTTACAGTACATCTACTACCAGCACGGTGCTTGCTCATCTTCGCCAGATTTACAAAACAGTGAATACAATGTATCTGCCGCACCATTTGTCTCTTCACAGTCCACCAGAAGCATGACAGAGCAACCGCACGGTATACCATTTGACACAATTGCTTCCGAGTTTTCTGTGAGAAGCCAAAATTCATCAATGGATCACCAATATGCAGTGTCGGAGACAAAAGACAGACAACCACCTCCCTCTGGCTCTCTTGAGTCTGTACTACCTATCTCTTATCCAGATATGGTTTCTTCTACACTAAGAGAGGTTGTTGTCCCTGTTGATGATCCTCCATACTACCAGAATCAAGAGGAAGAAAACGCAGTCACCGGCGAACAATCTTATGAATACATTGATGAattttgcatcaacaagccagaatcagcagcagttttcaatgagccaattgattgtattacttcaggtatccagtcATGTTTACGAGTTGTATCAAATACAGACGAAGAGGATGGAGTTGAATCTGCATCTCCTGAAAAAGAAGGGGCAGTGTGTGTTAATCCTGAATATGAAAGTAAGCTTGCAAAAGCTGATAATGGAAACTTCTATAACCCTATTGGTGATTCGGAAACTTCTGAAACAGAGCATGAACTTTATGGTTTACAGATTATTGAGAATGGTGATCTCGAAGAACTACAAGAGTTAGGATCTGGAACCTTCGGAACTGTTTTTCATGGCAAATGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAGAGTAGTTGTTTCGCTGGTAGACTGTCAGAGCAAGAGCGGACCAAAGATTTTTGGAGAGAGGCAAAGATTCTATCGGCACTTCACCATCCAAATGTGGTGGCATTCTACGGGGTAGTTCCCGATGGCCCAGGTGGAACATTGGCAACCGTAACAGAATACATGGTGCATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAGAGAGTGCTTGACCGTCGTAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAACTTGGGTGATCCTGAACGGCCTGTATGTAAGGTTGGAGATTTTGGCCTATCAAGAATTAAACGCAACACACTTGTTTCGGGTGGTGTCAGAGGGACTCTTCCATGGATGGCTCCGGAATTACTGGATGGTAACAGTTGTAGAGTATCTGAGAAGGTCGATATTTTCTCATTTGGCATCGCAATGTGGGAAATCTTAACTGGGGAAGAACCTTATGCTAACATGCACTGTGGTGCCATCATAGGAGGTATTGTCAGTAATACGCTCAGGCCATCTATTCCGAAGCGCTGCGATTCAGAGTGGAAAAAGTTGATGGAAGAGTGTTGGAGCCCTGATCCTGCAGCCAGGCCATCCTTCACAGAAGTTAAAAACAGATTGCGCAACATGTCAGCTGCACTACAGAGAAAGAGACCTACTATTGGGAATCGGTGA 3513 0.4048 MNNEDPGISGNPYKGTVNVGFSDRTPSDKDDEDNICLQTGEEFSAEFLRDRVALRRFPVITEAEQRMPNRLDFNINNNNNNYQLFYEDQKHTLGLGRMDSDSNLDLSEIALARGYVAEVDNRAYHNNLSRYQFEHGGMRQASSAFSRQLSSKFSDGCDQLASGLNSPSIYAAESPRSCHPYGSVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITHEELTRKTSDICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLLPSNESESPSSNESRVNQPSDADYHYVVAVNGMLDPSPRKNPSAPSLVSHTSQFANNSDYNNPHFHRESSTSLFASEIKDFSPTSSNLAGIMSKPGPFLTALNVPGRSYNQTPPSPICVHPKDPKISNVQLFTDHQPYNVVNESMIPFVMEKNPRDNSLYVDSTSYVDPIAYYNNPPQGPSCVNYHPSNQYTLESEQIRKSNADFHFHRRNNSKEFVSPAICNQTDMIFERPLVNNEGSYHFNKILSHPHDSSSIFSVADDRDVSQYRMLHALSDSTLLENSENYRGHLQFPLNVERDKLSSLETSSSLEECSIQTGEVSDGKDRTALHQNLSAFGMTDNFQRLSDIRKENLQCADQSTDWFDEKVGAMPQHLQYIYYQHGACSSSPDLQNSEYNVSAAPFVSSQSTRSMTEQPHGIPFDTIASEFSVRSQNSSMDHQYAVSETKDRQPPPSGSLESVLPISYPDMVSSTLREVVVPVDDPPYYQNQEEENAVTGEQSYEYIDEFCINKPESAAVFNEPIDCITSGIQSCLRVVSNTDEEDGVESASPEKEGAVCVNPEYESKLAKADNGNFYNPIGDSETSETEHELYGLQIIENGDLEELQELGSGTFGTVFHGKWRGTDVAIKRIKSSCFAGRLSEQERTKDFWREAKILSALHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLLKKERVLDRRKRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVSNTLRPSIPKRCDSEWKKLMEECWSPDPAARPSFTEVKNRLRNMSAALQRKRPTIGNR 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00827 1170 ProSiteProfiles Protein kinase domain profile. 891 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00827 1170 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 691 1165 - -
Car04g00827 1170 Gene3D Transferase(Phosphotransferase) domain 1 978 1167 - -
Car04g00827 1170 CDD PB1_UP2 197 292 - -
Car04g00827 1170 Pfam PB1 domain 209 292 IPR000270 GO:0005515
Car04g00827 1170 Gene3D - 212 295 - -
Car04g00827 1170 SMART serkin_6 891 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00827 1170 SUPERFAMILY CAD & PB1 domains 209 303 - -
Car04g00827 1170 MobiDBLite consensus disorder prediction 725 743 - -
Car04g00827 1170 Pfam Protein tyrosine and serine/threonine kinase 893 1153 IPR001245 GO:0004672|GO:0006468
Car04g00827 1170 MobiDBLite consensus disorder prediction 725 747 - -
Car04g00827 1170 Gene3D Phosphorylase Kinase; domain 1 884 977 - -
Car04g00827 1170 SMART PB1_new 208 295 IPR000270 GO:0005515
Car04g00827 1170 MobiDBLite consensus disorder prediction 1 33 - -
Car04g00827 1170 MobiDBLite consensus disorder prediction 1 23 - -
Car04g00827 1170 PRINTS Tyrosine kinase catalytic domain signature 1080 1102 IPR001245 GO:0004672|GO:0006468
Car04g00827 1170 PRINTS Tyrosine kinase catalytic domain signature 972 985 IPR001245 GO:0004672|GO:0006468
Car04g00827 1170 PRINTS Tyrosine kinase catalytic domain signature 1009 1027 IPR001245 GO:0004672|GO:0006468
Car04g00827 1170 PRINTS Tyrosine kinase catalytic domain signature 1124 1146 IPR001245 GO:0004672|GO:0006468
Car04g00827 1170 PANTHER SERINE-THREONINE PROTEIN KINASE 691 1165 - -
Car04g00827 1170 MobiDBLite consensus disorder prediction 327 347 - -
Car04g00827 1170 PANTHER SERINE-THREONINE PROTEIN KINASE 83 660 - -
Car04g00827 1170 SUPERFAMILY Protein kinase-like (PK-like) 876 1153 IPR011009 -
Car04g00827 1170 ProSitePatterns Protein kinases ATP-binding region signature. 897 918 IPR017441 GO:0005524
Car04g00827 1170 CDD STKc_MAP3K-like 897 1153 - -
Car04g00827 1170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1015 1027 IPR008271 GO:0004672|GO:0006468
Car04g00827 1170 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 83 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00827 Car-Chr4 8195083 8200522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00827 26 325 MAP Kinase Kinase Kinase AT1G16270 38.411 5.44e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car04g00827 PK_Tyr_Ser-Thr 1.7e-62 CL0016