Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00814 atgctcatcctcTTCTTCACTCTCTTAACTCTCCCCCTCCAATCCCTCACCGCCACGTGTCCCCTCAACTTCACTCTCCTAACCATCCTCTCCGGCGGCTCCAAACCCTCCTCCTTCGACTCAACACCCTGTCAATTCGTCCACCAATCCCTCCGCCTCGTCCAATCCGACTACCTCCGCCGCACCGGCTTCTTCCTCCCTCCCCTAAACACCTCCCTACCATGCTGGACCTCTTTCCAATCCTACATCAACCAATTCGCACCAACCTTCAACATTCGCTCCTCTTGCGGCTTCCAAACCAATTGGATCTCTCAAGGTTGCGTCAACGTCACAACCAAACAACAATTCGaatccatcgttcctcaatccacaattctcaacatgcaatccAATTGTAACCAATCCATTGAAGATAATTCCCCTTGTGCTCTTTGCACCACCAGTTTATCAGGTTTACCCCCTCTCGGAAAATCCATCGGAAACCTCTCCGATTGCACCGGTTATCCTTCAATCTATGCCGCCGCTTTTTCAAATCAATTTGGACCGTCCGATCCTGGTACTGCTAAGTGTTTATTCGCCCTTGATTTCACCTCTGGAAGTTCCTCTGCTAATAAAAGAAAGGTAAATGGAAATGGTGATAAGGATCATGGTGTTATTAATATTGCTGACAAGGGTTTAGTTTCTGGGTTGCATTCAATGGAACAAAGTACTACTTTGATTAATTTTAGTATTGAGGATGTTAAGAAGGCTACTAAGAATTTTTCTAGGGATAATATAATTGGGAGAGGGGGTTATGGGAATGTGTATAAAGGTTTGTTGTCTGATGGAAGTGAAGTTGCTTTGAAGAGGTTTAAGAATTGTTCTGCTGCTGGTGATGCTAGTTTCACTCATGAGGTTAAGGTTATTGCTAGTGTTAGGCATGTGAACCTTGTTGCTTTGAGAGGTTATTGTAGCGCAACAACGCGTTTGGAAGGTTACCAGAGGATTATTGTTTGTGATTTGATGCAAAATGGGAGTCTTCATGATCATTTGTTTGGTTCTTTAGGTGTGAAGCTTAGTTGGCCGCTTCGACAGAAGATTgctcttggaacagctaggggattggcttatttgcattatggagttcaacctgctatcattcatagagatattaaagcaaataatatacttttggatgataagtttgaagctaaggttgctgatttcggacttgcaaagtttaatccagaaggaatgactcatatgagtacgagggtggccggaacgatggggtatgttgctcctgagtATGCTTTGTATGGACAATTAACAGAGAGGAGTGATGTGTTTAGTTTTGGTGTTGTGCTTCTTGAGTTACTTAGTGGGAGAAAGGCTCTTCAAACAGACATTGATGGACAACCTTCTGCTTTGACTGATTGGGCTTGGTCATTGGTTAGAACAGGCAAGGCTTTGGATGTCATTGAAGATGGGATGCCGGAACAACGTTCAAATCAAGTTCTTGAGAAGTACGTGTTGATTGCTGTGCTTTGTTCACACCCGCAGTTATATGCTAGGCCGACGATGGATCAGGTCGTTAAAATGATGGAGGCTGATGATGAATTGGTGCCCTTAATACCCGGACGACCGATACCTCTTGTCGCAGGGAGGCTTGATATTGAGAGATCGATTAGCAGTAGTGGTGGCTCCGGTCAGCTCTCTAGTCCAACAGGTTACCAATCATTCACATTAGAAATGGGAAGCGAACTCCATTCTTCGAATTCTAGGGAAGAAAGAAGCTCTAGCTCTAGGATTTTGGGTTCCGATTGA 1806 0.3832 MLILFFTLLTLPLQSLTATCPLNFTLLTILSGGSKPSSFDSTPCQFVHQSLRLVQSDYLRRTGFFLPPLNTSLPCWTSFQSYINQFAPTFNIRSSCGFQTNWISQGCVNVTTKQQFESIVPQSTILNMQSNCNQSIEDNSPCALCTTSLSGLPPLGKSIGNLSDCTGYPSIYAAAFSNQFGPSDPGTAKCLFALDFTSGSSSANKRKVNGNGDKDHGVINIADKGLVSGLHSMEQSTTLINFSIEDVKKATKNFSRDNIIGRGGYGNVYKGLLSDGSEVALKRFKNCSAAGDASFTHEVKVIASVRHVNLVALRGYCSATTRLEGYQRIIVCDLMQNGSLHDHLFGSLGVKLSWPLRQKIALGTARGLAYLHYGVQPAIIHRDIKANNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTDIDGQPSALTDWAWSLVRTGKALDVIEDGMPEQRSNQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMEADDELVPLIPGRPIPLVAGRLDIERSISSSGGSGQLSSPTGYQSFTLEMGSELHSSNSREERSSSSRILGSD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00814 601 Gene3D Phosphorylase Kinase; domain 1 223 333 - -
Car04g00814 601 ProSiteProfiles Protein kinase domain profile. 254 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00814 601 Pfam Protein kinase domain 255 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00814 601 MobiDBLite consensus disorder prediction 557 582 - -
Car04g00814 601 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 9 208 - -
Car04g00814 601 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 212 585 - -
Car04g00814 601 MobiDBLite consensus disorder prediction 557 601 - -
Car04g00814 601 PANTHER OS01G0253100 PROTEIN 9 208 IPR045271 GO:0004714|GO:0006468
Car04g00814 601 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Car04g00814 601 SMART serkin_6 254 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00814 601 SUPERFAMILY Protein kinase-like (PK-like) 228 528 IPR011009 -
Car04g00814 601 PANTHER OS01G0253100 PROTEIN 212 585 IPR045271 GO:0004714|GO:0006468
Car04g00814 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Car04g00814 601 CDD STKc_IRAK 260 529 - -
Car04g00814 601 Pfam SPARK 17 151 IPR043891 -
Car04g00814 601 Gene3D Transferase(Phosphotransferase) domain 1 335 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00814 Car-Chr4 8056783 8058681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00814 1 576 Receptor kinase-like Gene Family AT2G48010 61.692 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Car04g00814 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00814 - - gmx:100794233 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00814 04 8056783 8058681 Car04g00814 04 8056783 8058681 ECH
Car03g02211 03 68188380 68190683 Car04g00814 04 8056783 8058681 ECH
Car03g02211 03 68188380 68190683 Car04g00814 04 8056783 8058681 PCT