Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00806 ATGGGTTCCAAGCCGTGGCTACACCCTGCTCCAACTTATAGAGCCATTGAAAGTTTTTGGGATACCGATGAAGACGCTCCTGGTCCTCGCTGTGGACATACTCTAACCGCCGTAGCTGCCACTAAGTCGCATGGTCCGCGTTTGATTCTATTCGGCGGCGCTACTGCCATTGAAGGAGGATCTTCTTCAGCTCCTGGCATTCGATTAGCTGGAGTTACGAATTCCGTTCATTCTTATGATCTTCAAACAAAAAAATGGACTAGGATTAAGCCTGCCGGAGACCCACCCTCTCCTCGGGCTGCTCATGCCGCAGCCACGGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCCGGACATTCAACCGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAAGGACCGGGGCCTCGCTATGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAACGAGTTGTATCTGATGCCTGGACTTTGGATACGGCTCAAAAGCCTTATGCGTGGCAGAAGCTGAACCCAGATGGTGATAGGCCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGACGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCTAGGTATCAACATGCATCTGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGAGTTCTTAGGGGTGGACGCGCTGTGGAAGGGGAAGCATCCGTTGCAGTATTGGACACTGCTGCCGGGGTTTGGTTGGATAGAAACGGCATTGTGTCCTCCTCACGACCAAACAAAGGTCATGATTATGACTCTTCTTTAGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCAAGTCTATATCTATGGTGGTCTTAGAGGAGATATACTACTGGGTGATTTCTTAGTGGCTGAAAATTCACCATTGCAGTTCGACAGTAGTGAGAGAGCTTCAAGTCCTAAACATAATATGCCTAACTTAAATTATAATGTTAATACACCGAGTATGGATGGTGGACCAGAAATTCCGTCATCTGGTGGCTCTGGCTTGGACAAACATTCCCTGGAAAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGCAGCTAGTGCTGTCTGGCAATCTGTGCAAGCTATATCAAGTAATCCTACTGATGAAACATCTGTGTCAGATTACAACTCACATGCTGCAGACACAGTTTCAGATGGAAGTGACACCGAGGGAGATGTTCGCCTTCACCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTGTTGGTAACCTAGGTGGAATGGTCAGACAATTGTCACTGGATCAATTTGAAAATGAAAGCAGGCGCATGAATCCCATAAATAATGATTTTCCATATACTACAAAAAAGTTCACCAGGCAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCAAATTTGCTCAAACCTCGCAACTGGAAAGCACCTGCAAATAGGCGGTTCTTCTTGGATCCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCGACTGTTCTTCAACTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACAGCAGGAGACATCACGTATATTGACTACCTGTTTTTAGGAGATTATGTTGATCGAGGACAGCACAGCCTGGAAACCATTACTTTGCTACTTGCTCTTAAGATTGAATATCCTGACAATGTTCACTTGATACGTGGAAACCATGAAGCGGCTGACATAAATGCACTGTTTGGTTTTCGCATAGAGTGCATTGAACGAATGGGGGAAAATGATGGAATATGGGCGTGGACAAGATTCAATCAACTTTTTAACCATCTTCCACTAGCTGCTCTTATTGAAAAGAAAATCATCTGTATGCATGGTGGCATTGGAAGATCTATCAATTCAGTAGAGCAGATAGAGAAGATTGAAAGACCAATAACAATGGATGCAGGATCTATTATTTTAATGGACCTGTTATGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGCTTGAGACCAAATGCTAGAGGGCCCGGGCTCGTCACTTTTGGGCCTGACCGTGTTACAGAGTTCTGTAAGAAAAATAAATTACAGCTCATCATAAGAGCCCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAACTAATCACACTTTTTTCTGCAACTAATTATTGTGGTAAGCATGATTTCTCATAA 2427 0.4512 MGSKPWLHPAPTYRAIESFWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDLQTKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWTLDTAQKPYAWQKLNPDGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEASVAVLDTAAGVWLDRNGIVSSSRPNKGHDYDSSLELMRRCRHAAAAVGVQVYIYGGLRGDILLGDFLVAENSPLQFDSSERASSPKHNMPNLNYNVNTPSMDGGPEIPSSGGSGLDKHSLEKLREASAAEAEAASAVWQSVQAISSNPTDETSVSDYNSHAADTVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMNPINNDFPYTTKKFTRQKSPQGLHKKIISNLLKPRNWKAPANRRFFLDPYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNHLPLAALIEKKIICMHGGIGRSINSVEQIEKIERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGKHDFS 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00806 808 MobiDBLite consensus disorder prediction 364 406 - -
Car04g00806 808 Gene3D - 9 194 IPR015915 GO:0005515
Car04g00806 808 MobiDBLite consensus disorder prediction 364 391 - -
Car04g00806 808 ProSitePatterns Serine/threonine specific protein phosphatases signature. 642 647 IPR006186 GO:0016787
Car04g00806 808 SUPERFAMILY Kelch motif 73 357 IPR015915 GO:0005515
Car04g00806 808 Pfam Serine-threonine protein phosphatase N-terminal domain 524 571 IPR031675 -
Car04g00806 808 MobiDBLite consensus disorder prediction 434 453 - -
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 769 789 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 608 635 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 679 705 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 573 600 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 641 665 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 709 736 IPR006186 GO:0016787
Car04g00806 808 PRINTS Serine/threonine phosphatase family signature 791 807 IPR006186 GO:0016787
Car04g00806 808 SMART pp2a_7 545 808 IPR006186 GO:0016787
Car04g00806 808 Pfam Galactose oxidase, central domain 115 155 - -
Car04g00806 808 Pfam Galactose oxidase, central domain 45 105 - -
Car04g00806 808 MobiDBLite consensus disorder prediction 434 461 - -
Car04g00806 808 SUPERFAMILY Metallo-dependent phosphatases 527 805 IPR029052 -
Car04g00806 808 Pfam Calcineurin-like phosphoesterase 573 780 IPR004843 GO:0016787
Car04g00806 808 Gene3D - 195 433 IPR015915 GO:0005515
Car04g00806 808 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 804 - -
Car04g00806 808 PIRSF STPPP_BSU1 1 808 IPR012391 GO:0004721|GO:0009742
Car04g00806 808 Gene3D - 505 807 IPR029052 -
Car04g00806 808 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00806 Car-Chr4 7961725 7973897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00806 534 772 Calmodulin-binding Proteins AT5G63870 30.797 6.54e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00806 K01090 - gmx:100805538 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00806 04 7961725 7973897 Car04g00806 04 7961725 7973897 ECH