Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00803 ATGAAGAACAGATTTTCACTAGTGACTTGCATGGTACTTTTAAGCTTCCTTGTGGCTTGTCAAGGAGGCAGCCTCAGGAAGAACTTTTACCAACACTCTTGCCCTCAAGCTGACAACATTATTAAGAACAAAACCTTGCAGCACGTCGCTGCTAATCCCAACTTACCTGCTAAGTTGCTTAGAATGCATTTTCATGACTGTTTTGTCAGGggttgtgatgcgtcggtgttgttgaactcgactgacaataacactgcagagaaggatgcaattcctaatttaactttggctggcttcaatgtcattgatgacataaaaaatgcggttgaggctatatatcccaagactgtgtcttgtgctgacatattagcattggctgctagggatgctgtttcAGTACAATTTAACAAACCTATGTGGGAAGTGCTCACTGGTAGAAGAGATGGCACAGTATCGAAAAGAAGTGAAGCCTTGGCCAATATTCCAGCACCTACCTTCAACTTCACCCAACTCAAACAAAACTTTGCAAGTAAAGGTCTCACCTTGCATGATCTGGTTGTATTATCAGGAGCACACACAATTGGAACAGGTCATTGCAACTTCTTCAGTAACAGGCTTTATAATTTCACTGGAAAAGGCGATCCCCTTCTTTGA 654 0.3012 MKNRFSLVTCMVLLSFLVACQGGSLRKNFYQHSCPQADNIIKNKTLQHVAANPNLPAKLLRMHFHDCFVRGCDASVLLNSTDNNTAEKDAIPNLTLAGFNVIDDIKNAVEAIYPKTVSCADILALAARDAVSVQFNKPMWEVLTGRRDGTVSKRSEALANIPAPTFNFTQLKQNFASKGLTLHDLVVLSGAHTIGTGHCNFFSNRLYNFTGKGDPLL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00803 217 SUPERFAMILY Heme-dependent peroxidases 25 214 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 Gene3D Peroxidase, domain 2 162 213 - -
Car04g00803 217 ProSiteProfiles Plant heme peroxidase family profile. 24 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PANTHER PEROXIDASE 25-RELATED 5 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PANTHER PEROXIDASE 5 214 - -
Car04g00803 217 Pfam Peroxidase 47 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 CDD secretory_peroxidase 25 215 IPR033905 GO:0004601|GO:0042744
Car04g00803 217 Gene3D - 28 161 - -
Car04g00803 217 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g00803 217 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Car04g00803 217 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00803 Car-Chr4 7954131 7955549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00803 16 217 Peroxidase AT1G05260 59.420 8.66e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00803 K00430 - gmx:100799691 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00803 04 7954131 7955549 Car04g00803 04 7954131 7955549 ECH
Car03g02722 03 72870086 72871827 Car04g00803 04 7954131 7955549 PCT