Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00783 ATGGTTGAAACTAGACGCAGTTCCTCTTCTTCCAAGCGCTCTCTCTCTTCTCCTTCATCTCCTCCTTCAAGCACTAAACGATCCAAGGTTTCAGAGGATGTCTCATCCGCTGCAAATCCCTCGCCGTCGGTTAACGAATCCGCCAAAGGAGATATACGGTCATCTGATCTGCAAGAAACGTCGTCGTTGAATGCTGTTGATTGTGATAACGATAAGTCTTCTTCTGTGGCTGTCAAAACTGAGGCTTTAATGTCTCCTCTTCGGTGTTTAGACTCAGGTGACATTGCGGAGAAATCAAAGGGTTTGCCACCCATAGCTCGGCCGAAGAAACGCGGCATCAAACTGTGTCCCAAGGCTGAGGATGCTTGGGGAAAGCTCATTTCTCAATCTTCCGAGAATCCTCACCTGTCCATGTGTGAGCCTATTTACACAGTTGGTCAAGGTCGACAATGTAATTTATGGCTTAAAGATCCCGCTCTTAGTCATGTTTTGTGCAAATTGAGCCACATAGAGTTTGCACAGCATGGAAGTTCATCTGTTGCATTGCTTGAAATCGTAGGGAGTAAAGGTGCTGTGCAAGTTAACGGGAAGTCATATGGTAAGAAATCCTGTCTAATTTTAAGTGGAGGTGATGAGGTTGTCTTTGGCTCTTCAGGGAAGGAAGCTTATATCTTTCAGCAGCTCAGTAATAATAATAATAATGTCACTACTGCCAGTGCCAATGTACCTTCTCCTGTGAGTATTTTAGAAGCCCAGGGTGCTCCAATAACTGGAACGCAAGTTGATGCTAGATCTGGAGACCTATCGGCTGTTGCTGGAGCTTCAATATTAGCTTCTTTTCCTAATCTTGATAAAGAATTATCTGTCACTCCACCTCCTGGTAACACTAGCATGAACTTGCAACAGAACACTGACGTTGCATCAGTACCTGCCAGTAATGGGGATGAAACGCCAAACACTGAAGTGAAGCAGAGCACCAATCATAAAGAATCGAATGGAGTTTTTTCTTCTGAGGAAACTGGTCTTCTGTCCTCTGCCACTGTTAATGAAGATCCTAAGGTTGACTCTCTAGATGTCAATGCTGGTGTGGATACAGATGTTGGGAAGACGACTGCTCCTGCAGGCAACTTGAGACCATTATTGCACAAGCTTTCTGGATCATGTCCTGCATTTGATTTAAGTGGCAACATTGCCAGGATATTGGGAGAACGAAAGGAATTAAGGGAACTCCTTAAAGATGTTGATACCCCGACAGCATTGGCACCGCCCAGGAAACAAGTTTCGACGGATAATTTACGGTTGAGAATTCTCTGTGCTGAGAATATTGATGTTTCATTTGAAAGTTTCCCATATTATCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTGTGTACATTCATTTGAAGTGCAATGGCTCTGGAAAATTTGTTTCAGACCTTCCGTCATTGTCCCCTCGGATATTGTTATCTGGTCCTGCAGGTTCAGAAATATATCAAGAGACTCTGTCCAAGGCACTTGCAAAATATTTTGGTGCGAGGCTATTAATTGTGAATTATCTCTCTCCTCCCGGGCGAGCACCACTGAAGGATGTTGATTCTACCAAAGAAAGTTCAAGGCCTGAAAGACCATCTGTGTTTACCAAGAGAAGTACTCAAGCTATTACATTACCGCTCAAGAGACCATCTACTAGTGTTGATGCCCAAATTATAGGTGGTTCCTCATTAAGTTCACCGGCTATTGTGAAGCAAGAAGTTTCTACGGCATCGTCAAAAGGCATTACTCTTAAAACAGGTGATCGGGTAAAATTTGTCGGTGATTTCCCTTCTGCTGTCTCATCACCGCAAGATTTTCCTTCAAGGGGGCCGAGTTATGGTTGCCGGGGCAAAGTTCTCCTCGCTTTTGAAAATAATGGGTCTTCAAAAATTGGGGTTAGATTTGAGAAATCAATTCCAGATGGAAACGATCTTGGTGGCCTTTGTGAAGATGACCGTGGCTTCTTTTGTGCTGCCAATCATTTAGTACTGGTAGATGGTTGTGGAGGGGACGAATCTAGCAAAATTGCTGTTAGTGAAATCTTTGAGATTGCCTCTAATCTGAGTAAAACTGGAGCACTAGTGGTGTTCATTAAAGATATAGAGAAGGGTGTGGCTGGGAACTCAGAAGTTTTGAAAAGTAGGCTCAGTAACTTGCCACCAAATGTTGTAGTAATTGGTTCACATATCCAACCGGACAATCGTAAGGAGAAGACCCAACCTGGCAGTCTTCTGTTTACAAAATTTGGAGGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTACTAGACTCCATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAGCAACTCAATAGGCTTTTCCCAAACAGAGTTACAATACAGCTGCCTCAGGATGAGGCTTTGATTTCTGATTGGAAGCAGCAGCTAGAACGTGACATAGAAACTATGAAAGCTCAGTCCAACGTTGTCAGCATTCGCTCAGTTCTCAAAAGGTTTGAACTGGATTGCCCTGACCTTGACACTCTCTGCATCAAAGATCAAACTCTGACAACTGAAAATGCGGAGAAGATTATTGGCTGGGCTATAAGTTACCATTTTATGCATTCATCTGAACCTTCTTTCAATGATTCAAAGCCTTTGATATCTGCTGAGAGCATTCAATATGGGTTTAACATTCTACAGGGCATTCTAAATGAGAACAAAAGCGTAAAAAAATCACTGAAGGACGTAGTTACTGAGAATGAATTTGAGAAAAAACTGCTTGCTGATGTTATTCCACCAACTGATATTGGGGTCTCATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTAAAGGAATTGGTTATGCTTCCTCTTCAAAGGCCTGAATTGTTTTGCAAAGGGCAACTAACTAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACGGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTTATTAACATCTCCATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCTAGCAAAATTGCTCCAAGCGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGGAGACGCGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTCAATTGGGATGGTCTGCGTACAAAAGATAGAGAGCGTGTACTTGTTCTTGCTGCCACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCAGATGCAACAAACAGAGAAAAAATTATGAGAGTCATTTTAGCAAAGGAAGATTTGGCGCCTGATGTTGATTTAGAAGCATTAGCAAATATGACTGATGGATATTCCGGAAGTGACCTAAAGAATCTGTGTGTCACAGCAGCGCATTGTCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGTTCGTTCATATATAATTTTCTTGGTTGAAGTCTTCATGATTTCCCGTCTTTTTTTTGCCTTCGTTGTGCTCAGGGATTGCATTAAGTTTCTTACATGTTGTATGACTATGTGCTTGAAGTTGGAAATCTTTGTCAGTTTGGTGCTGATCGAATAA 3684 0.421 MVETRRSSSSSKRSLSSPSSPPSSTKRSKVSEDVSSAANPSPSVNESAKGDIRSSDLQETSSLNAVDCDNDKSSSVAVKTEALMSPLRCLDSGDIAEKSKGLPPIARPKKRGIKLCPKAEDAWGKLISQSSENPHLSMCEPIYTVGQGRQCNLWLKDPALSHVLCKLSHIEFAQHGSSSVALLEIVGSKGAVQVNGKSYGKKSCLILSGGDEVVFGSSGKEAYIFQQLSNNNNNVTTASANVPSPVSILEAQGAPITGTQVDARSGDLSAVAGASILASFPNLDKELSVTPPPGNTSMNLQQNTDVASVPASNGDETPNTEVKQSTNHKESNGVFSSEETGLLSSATVNEDPKVDSLDVNAGVDTDVGKTTAPAGNLRPLLHKLSGSCPAFDLSGNIARILGERKELRELLKDVDTPTALAPPRKQVSTDNLRLRILCAENIDVSFESFPYYLSDTTKNVLIASVYIHLKCNGSGKFVSDLPSLSPRILLSGPAGSEIYQETLSKALAKYFGARLLIVNYLSPPGRAPLKDVDSTKESSRPERPSVFTKRSTQAITLPLKRPSTSVDAQIIGGSSLSSPAIVKQEVSTASSKGITLKTGDRVKFVGDFPSAVSSPQDFPSRGPSYGCRGKVLLAFENNGSSKIGVRFEKSIPDGNDLGGLCEDDRGFFCAANHLVLVDGCGGDESSKIAVSEIFEIASNLSKTGALVVFIKDIEKGVAGNSEVLKSRLSNLPPNVVVIGSHIQPDNRKEKTQPGSLLFTKFGGNQTALLDLAFPDNFTRLHDRSKETPKVMKQLNRLFPNRVTIQLPQDEALISDWKQQLERDIETMKAQSNVVSIRSVLKRFELDCPDLDTLCIKDQTLTTENAEKIIGWAISYHFMHSSEPSFNDSKPLISAESIQYGFNILQGILNENKSVKKSLKDVVTENEFEKKLLADVIPPTDIGVSFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNREKIMRVILAKEDLAPDVDLEALANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKVRSYIIFLVEVFMISRLFFAFVVLRDCIKFLTCCMTMCLKLEIFVSLVLIE 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00783 1227 Pfam ATPase family associated with various cellular activities (AAA) 984 1113 IPR003959 GO:0005524|GO:0016887
Car04g00783 1227 MobiDBLite consensus disorder prediction 307 351 - -
Car04g00783 1227 MobiDBLite consensus disorder prediction 528 550 - -
Car04g00783 1227 CDD AAA 982 1115 - -
Car04g00783 1227 Gene3D - 122 236 - -
Car04g00783 1227 MobiDBLite consensus disorder prediction 307 371 - -
Car04g00783 1227 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1180 - -
Car04g00783 1227 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1180 - -
Car04g00783 1227 MobiDBLite consensus disorder prediction 1 70 - -
Car04g00783 1227 MobiDBLite consensus disorder prediction 530 544 - -
Car04g00783 1227 Gene3D - 942 1115 IPR027417 -
Car04g00783 1227 Gene3D - 1116 1175 - -
Car04g00783 1227 ProSitePatterns AAA-protein family signature. 1087 1106 IPR003960 GO:0005524|GO:0016887
Car04g00783 1227 SUPERFAMILY SMAD/FHA domain 122 221 IPR008984 GO:0005515
Car04g00783 1227 SMART AAA_5 980 1117 IPR003593 -
Car04g00783 1227 CDD FHA 143 217 IPR000253 GO:0005515
Car04g00783 1227 Pfam AAA+ lid domain 1137 1172 IPR041569 -
Car04g00783 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 943 1173 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00783 Car-Chr4 7726517 7740474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00783 943 1175 Calmodulin-binding Proteins AT3G56690 41.772 9.07e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00783 - - gmx:100801477 1675.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00783 04 7726517 7740474 Car04g00783 04 7726517 7740474 ECH