Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00779 ATGTTTTCTTCTCTAGATTCAACTTGGATCACATCTCTATCATGTTCATCTTCTTCAAAGGAACATGAACGTGCATATGGATTAGTTCAATGGTTGAGATTCATTTTTCTCTCACCATGTCCTCAGAGAGCTCTTCTCTCAGCTGTTGATGGTTTACTCTTGTTGACTTTATTTGTGTTTGCAATCATAAAACTCTATTCTAGGTTCAGTTCTTCCAATGGAACCAACACTGAAATTAACAAACCCCTTATAAGTAACACTAGGGATTTGAGAACAAAAACAACTATATGGTTCAAGCTAACTCTAATTGCTACTGCTGTTTTAACTCTATTGTATACAGTAGCTTGCATTTTAGTGTTTAGCAGTTCAATTGAATCACCATGGAAACTAGTTGATGGACTATTTTGGGTTGTTCAAGCAATAACTCAATTAGTCCTTGTAATCTTGATTATCCATGTGAAAAAATTTGAAGCTGTTGTTCACCCTTTGTCGCTTCGAATTTATTGGATTGCGAATTTTGTTGTTGTTTCTTTGTTTGCTGCTTCTGGTGTCATACGTTTTGTTTCTGTGGAGGGAAATTACTTGTTCAGCTTTATGGTTGATGACATTGTGTCTTTCATTTCTCTACCAATTTCTCTTTTTCTGGTTTTTGTTGCTGTGAATGGATCCACTGGTGTTGTTAAGTCAAGAGATGGAACTCAAGTGGTTGTTGATAATGACCATGAAACAAAACTATATGATTATGTTGATGATCCAGCTTTGAATAAACCAAATGTTACTACTGGTTTTGCTTCAGCTTCTCAATTTTCTAAGACCTTTTGGATTTGGTTAAACCCTTTGTTGAATAAAGGGTACGGGTCACCTCTTACTCTTGATGAAGTTCCATTCCTTTCTCCAGAGCATAGAGCTGAGAGAATGTCTGTTATCTTTGAATCAAAATGGCCTAAATCTGATGAAAGATCAAAGCATCCGGTTAGAACCACGTTGATTCGGTGTTTCTGGAAGGAGATAATCTTCACTGCTTTTCTTGCTGTTATTAAGCTCTCTGTTATGTTTGTTGGACCAGTTCTCATTCAAGATTTTGTTGATTTCACTTCTGGGAAAGGTAGCTCGCCGTATGAAGGTTACTATCTGGTGTTGATTCTTCTTGTAGCCAAATTTATTGAAGTTTTGACAACTCATCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATAAGATGCACACTCATTACTTCTTTGTATAAGAAGGGGTTGAGACTATCTTGTTCTGCAAGGCAGGATCATGGTGTTGGGGCTATTGTGAATTACATGGCTGTTGATACACAGCAACTGTCTGATATGATGCTTCAGTTACACGCCATTTGGATGATGCCATTTCAAGTTGCTATCGGTTTGTTTTTGCTTTACAATTGTCTCGGTGGTTCAGTGATCACGGCACTGATTTGCCTTCTTCTTGTCCTCGTGTTTATCGTGGTGACAACTCGACAGAACAAAGGTTACCAGTTTAAAGCGATGATGAACCGTGATTCGAGGATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTCATCAAGTTTCAGGCATGGGAAGAGCATTTCAATAAAAGAATCTTGAGTTTCCGCGGGTCGGAATTCGGGTGGCTTTCCAAGTTTATGTACTCGATTTGTGGCAATGTTATTGTGTTGTGGAGCTCTCCTTTATTGATATCAACTCTAACTTTCGCTACCGCGCTTTTCTTTGGAGTTAAACTTGATGCAGGAACTGTTTTCACTACAACAACTGTGTTTAAGATCCTGCAGGAGCCTATTAGGACTTTTCCTCAGTCAATGATATCTCTTTCACAGGCATTGGTATCACTTGGGAGGTTGGATAGGTACATGTCTAGCAGGGAATTACATGATGATTCGGTCGAGAGAAATGAAGGGTGTGATGGTGTAACTGCTGTGGATGTTAAAGATGGTACCTTTAGTTGGGATGATGATGGCCAAAAACCAGACTTGAAAAATATTAATTTGAAGGTTAATAAGGGGGAACTCACAGCTATTGTTGGTACTGTTGGGTCTGGAAAGTCTTCTCTTCTCGCATCAATTCTCGGCGAAATGCACAGAATTTCTGGAAAGGTTCAAGTTTGTGGGACTACTGCTTATGTTGCGCAAACGTCTTGGATTCAAAATGGAACAATTGAAGAAAATATTCTCTTTGGTTTACCAATGAACAGACAGAAGTACAATGAAATTATCAGGGTTTGTTGCTTGGAGAAAGACTTAGAAATGATGGAATTTGGAGATCAGACAGAGATCGGAGAGCGTGGCATCAACCTCAGTGGTGGTCAGAAGCAGCGTATACAACTCGCCAGGGCTGTGTACCAAGAGAATGATATATATCTTCTTGATGATGTCTTCAGTGCGGTTGATGCACATACTGGCTCTGAAATATTTAAGGAATGTGTAAGGGGAGCTCTAAAAGGCAAGACCATTGTTCTTGTAACACATCAAGTGGACTTCCTGCATAATGTCGATCGTATAGTGGTGATGAGGGATGGAGTGATAGTCCAATCAGGGAGATACAATGACCTACTTGATTCCGGATTAGATTTCGGTGTTCTGGTAGCTGCACATGAAACCTCTATGGAACTAGTAGAACAAGGCGCGGGCAAGCCCGGTGAAAATTCAGACAGGCCAATGGTATCTCCAAAGGGCAACAGAGAAGAAACCAACGGCGAAAGTAATTCACTTGACCAGCCAAAAACTGCCAATGGAAGTTCTAAACTTGTCAAAGAGGAGGAAAGAGAAACCGGAAAAGTTAGCTTAAACATCTATAAACTCTACTGCACTGAGGCTTATGGGTGGTGGGGAATTTCAACAGTACTTATTCTTTCTGTGTTGTGGCAAGCAACTATGATGGCAAGTGATTATTGGCTTGCATATGAAACCTCGATTGATCGTGCTGATCTTTTCGATCCTTCTGTGTTTATTTCCATCTATGGAATTATTAGTGTAGTATCAGTTGTTTTTATAGTGCTAAGATCCTACTCAATTACAATCTTGGGGTTAAAGACGGCACAAATTTTCTTCTCTCAAATTCTTAATAGCATCTTGCATGCTCCCATGTCTTTCTTTGACACTACTCCATCAGGGAGGATTCTAAGCAGGGCATCCACTGATCAGACCAACGTTGATATCTTCATCCCTTTGTTTTTCAATTTTGTGGTTGCTATGTATATTACAGTGGTCAGCATCTTCATAGTCACATGCCAGAATTCTTGGCCGACTGTTTTCTTGCTGATTCCTCTTTTTTGGTTGAACATTTGGTACCGGGGTTATTTTCTAGCTACATCTCGTGAGTTAACTCGCCTAGATTCAATTACAAAAGCACCTGTCATTGTTCATTTCTCCGAAAGCATTTCCGGGGTCATGACAATACGTGCGTTCAGAAAGCAGAAGGAGTTTGGTGTTGAAAACATTAAACGAGTGAATTCTAATTTGCGAATGGATTTCCACAACTACAGTTCCAACGCGTGGTTGGGTTTCCGCTTAGAACTGCTTGGAAGTTTAGTTTTCTGCACTTCTGCTTTGTTCATGATCATGTTACCCAGCAGTGTCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCCTATGGATTGTCGTTGAATTCGGTGCTGTTCTGGGCTATATACATGAGCTGTTTCATTGAAAACAAAATGGTATCAGTTGAGAGGATAAAACAGTTCTCAAATATTCCATCAGAAGCAGCCTGGAACATTAAGGATCGCATGCCTCCTGCAAATTGGCCTGGTCAAGGCCATGTTGATATTAAAGACTTGCAGGTCAGATATCGTCCGAACACTCCTTTGGTTCTTAAAGGCATTACTTTAAGCATTAACGGAGGAGAAAAGATCGGTGTTGTTGGTCGAACGGGGAGTGGAAAATCAACTTTAATTCAAGTTTTCTTCAGGCTGGTGGAACCTACCGGAGGGAAAATAATCATCGATGGCATTGACATATGCGCTTTAGGACTTCATGATCTCAGGTCTCGATTCGGTATCATCCCTCAAGAGCCTGTCCTTTTCGAAGGAACCGTCAGAAGTAACATTGATCCAACTGGACAGTATACAGATGATGAGATATGGAAGAGTTTGGATCGTTGTCAACTAAAAGATGCAGTGGCTTCTAAGCCTGAGAAACTTGACTCATTAGTGGTTGACAATGGAGATAACTGGAGTGTGGGACAGAGGCAGTTGCTTTGTTTAGGGCGTGTTATGCTTAAGCAAAGCAGGCTGCTATTTATGGACGAGGCTACAGCTTCTGTCGATTCTCAAACCGACGCTGTAATTCAGAAGATCATCAGAGAGGATTTTGCAGCGCGTACTATCATCAGCATTGCTCATAGGATACCAACTGTCATGGACTGCAATCGAGTGTTAGTCGTAGACGCAGGGCGTGCAAAAGAATTCGACACACCTTCCAACTTGCTCCAGAGGCAGTCACTGTTTGCAGCTTTGGTTCAAGAGTATGCGAACCGTTCCAATGACCTATAA 4548 0.4063 MFSSLDSTWITSLSCSSSSKEHERAYGLVQWLRFIFLSPCPQRALLSAVDGLLLLTLFVFAIIKLYSRFSSSNGTNTEINKPLISNTRDLRTKTTIWFKLTLIATAVLTLLYTVACILVFSSSIESPWKLVDGLFWVVQAITQLVLVILIIHVKKFEAVVHPLSLRIYWIANFVVVSLFAASGVIRFVSVEGNYLFSFMVDDIVSFISLPISLFLVFVAVNGSTGVVKSRDGTQVVVDNDHETKLYDYVDDPALNKPNVTTGFASASQFSKTFWIWLNPLLNKGYGSPLTLDEVPFLSPEHRAERMSVIFESKWPKSDERSKHPVRTTLIRCFWKEIIFTAFLAVIKLSVMFVGPVLIQDFVDFTSGKGSSPYEGYYLVLILLVAKFIEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGAIVNYMAVDTQQLSDMMLQLHAIWMMPFQVAIGLFLLYNCLGGSVITALICLLLVLVFIVVTTRQNKGYQFKAMMNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRILSFRGSEFGWLSKFMYSICGNVIVLWSSPLLISTLTFATALFFGVKLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELHDDSVERNEGCDGVTAVDVKDGTFSWDDDGQKPDLKNINLKVNKGELTAIVGTVGSGKSSLLASILGEMHRISGKVQVCGTTAYVAQTSWIQNGTIEENILFGLPMNRQKYNEIIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQENDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIVLVTHQVDFLHNVDRIVVMRDGVIVQSGRYNDLLDSGLDFGVLVAAHETSMELVEQGAGKPGENSDRPMVSPKGNREETNGESNSLDQPKTANGSSKLVKEEERETGKVSLNIYKLYCTEAYGWWGISTVLILSVLWQATMMASDYWLAYETSIDRADLFDPSVFISIYGIISVVSVVFIVLRSYSITILGLKTAQIFFSQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDIFIPLFFNFVVAMYITVVSIFIVTCQNSWPTVFLLIPLFWLNIWYRGYFLATSRELTRLDSITKAPVIVHFSESISGVMTIRAFRKQKEFGVENIKRVNSNLRMDFHNYSSNAWLGFRLELLGSLVFCTSALFMIMLPSSVIKPENVGLSLSYGLSLNSVLFWAIYMSCFIENKMVSVERIKQFSNIPSEAAWNIKDRMPPANWPGQGHVDIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDICALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDDEIWKSLDRCQLKDAVASKPEKLDSLVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAARTIISIAHRIPTVMDCNRVLVVDAGRAKEFDTPSNLLQRQSLFAALVQEYANRSNDL 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00779 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 959 1236 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00779 1515 Gene3D ABC transporter type 1, transmembrane domain 920 1254 IPR036640 GO:0005524|GO:0016021
Car04g00779 1515 Gene3D ABC transporter type 1, transmembrane domain 324 629 IPR036640 GO:0005524|GO:0016021
Car04g00779 1515 MobiDBLite consensus disorder prediction 905 924 - -
Car04g00779 1515 ProSitePatterns ABC transporters family signature. 777 791 IPR017871 GO:0005524
Car04g00779 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1514 - -
Car04g00779 1515 Pfam ABC transporter transmembrane region 959 1201 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00779 1515 Pfam ABC transporter transmembrane region 338 605 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00779 1515 SUPERFAMILY ABC transporter transmembrane region 329 634 IPR036640 GO:0005524|GO:0016021
Car04g00779 1515 CDD ABCC_MRP_domain1 652 851 - -
Car04g00779 1515 Gene3D - 630 889 IPR027417 -
Car04g00779 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1266 1506 IPR027417 -
Car04g00779 1515 SUPERFAMILY ABC transporter transmembrane region 953 1253 IPR036640 GO:0005524|GO:0016021
Car04g00779 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 866 IPR027417 -
Car04g00779 1515 Pfam ABC transporter 1290 1438 IPR003439 GO:0005524
Car04g00779 1515 Pfam ABC transporter 670 803 IPR003439 GO:0005524
Car04g00779 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 338 618 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00779 1515 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 89 1514 - -
Car04g00779 1515 CDD ABCC_MRP_domain2 1271 1491 - -
Car04g00779 1515 SMART AAA_5 1299 1483 IPR003593 -
Car04g00779 1515 SMART AAA_5 679 852 IPR003593 -
Car04g00779 1515 CDD ABC_6TM_ABCC_D1 339 626 IPR044746 GO:0140359
Car04g00779 1515 Gene3D - 1256 1507 IPR027417 -
Car04g00779 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 652 875 IPR003439 GO:0005524
Car04g00779 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1273 1507 IPR003439 GO:0005524
Car04g00779 1515 CDD ABC_6TM_ABCC_D2 956 1248 IPR044726 GO:0140359
Car04g00779 1515 MobiDBLite consensus disorder prediction 883 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00779 Car-Chr4 7689057 7696845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00779 652 868 Calmodulin-binding Proteins AT2G36910 32.203 5.07e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00779 - K05666 gmx:100793361 2448.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00779 04 7689057 7696845 Car04g00779 04 7689057 7696845 ECH