Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00770 ATGATCAAAAGAATACCACACCTTACCTTATTGCTTGCATTTATTTTTCTTTCACTCCTTGCAAATACTAGCCAATTGATATTTGCAGAAGGGAAAGACAATGTCAAAGAAGCTTGCAAAGTAACTAGGTATCAAGGCCTTTGTGTGCACTCTCTAGCACCATTCTCTAACAGTGCTGGAAGAAGCCCTAGCAAGTGGGCACGGGCAGGAGTGTCGGTGACAATCGCCGAGGTTGAGAATGTGCAAACATATCTGGCAAACTTGAATAGGCACGGGAGTTTAAGAGGAAGAGATAAACTTGCACTATTAGACTGTATTGAGTTATTTGCAGATGCACTTGATGAGCTTCATAGCTCACTAGGTGTGCTCAGAAAGCTTAGCAGAAGCACATTTGGTACCCAAATGGGGGATCTTAATACATGGATAAGTGCAGCATTGACAGATGAAGATACTTGCCTTGATGGATTTCAAGGGAAAAAAGATAGGAAAATTCAATTACTGCAAAATAGAGTTCTCAAAGTCTATTATAAAACCAGTAATGCTCTAGCTCTAGTCAACAAACTTTCCACTACAGCTTTAGAAAGCAATGATCCTTAG 597 0.402 MIKRIPHLTLLLAFIFLSLLANTSQLIFAEGKDNVKEACKVTRYQGLCVHSLAPFSNSAGRSPSKWARAGVSVTIAEVENVQTYLANLNRHGSLRGRDKLALLDCIELFADALDELHSSLGVLRKLSRSTFGTQMGDLNTWISAALTDEDTCLDGFQGKKDRKIQLLQNRVLKVYYKTSNALALVNKLSTTALESNDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00770 198 CDD PMEI-like_3 38 190 - -
Car04g00770 198 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Car04g00770 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 27 183 - -
Car04g00770 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 189 IPR035513 -
Car04g00770 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Car04g00770 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
Car04g00770 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 27 183 - -
Car04g00770 198 SMART PMEI_2 30 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00770 Car-Chr4 7632891 7633929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00770 35 193 Carbohydrate Esterase AT3G14310 32.927 1.10e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00770 - - gmx:100791264 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00770 04 7632891 7633929 Car04g00770 04 7632891 7633929 ECH