Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00766 ATGAGCGGAGCTAAGGGGAAGAAGAAGGGAACAAGCTTCGTCATCGATTGTGCGAAGCCGGTTGAGGATAAGATTATGGACATTGCTTCCTTGGAGAAGTTTCTTCAAGAGAGGATTAAGGTTGGTGGTAAAGCTGGTGCTCTCGGTGATTCCGTTACAGTTACTCGTGAAAAGAGCAAGATCACCGTTACCTCCGATAGCAATTTCTCCAAACGGTATCTGAAGTACTTAACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTGATTGCCTCCAACAAGGACCGCAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.45 MSGAKGKKKGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00766 119 PANTHER 60S RIBOSOMAL PROTEIN L22-2-LIKE 2 119 - -
Car04g00766 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Car04g00766 119 PANTHER 60S RIBOSOMAL PROTEIN L22 2 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Car04g00766 119 Gene3D - 1 119 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00766 Car-Chr4 7607414 7608924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00766 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 90.517 2.15e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00766 K02891 - gmx:100500073 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00766 04 7607414 7608924 Car04g00766 04 7607414 7608924 ECH