Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00751 ATGTGTGGCGGTGCTATCATCGCTGACTTCATACCTCGCCGTGGAGGCCGCCGTCTCACGGCCTCTgaactctggccttcttccttcggtcaacagaaagactcggatttcgatttttctcaaacaggtggtgatcaacAAACACCACCACCACCACCCACTCTCAAAAGATCCTACACTCCCACAGTTAGTGAGCAAGTTGAGAAACCGGTGAAAAAACAGAGGAAAAACCTCTACAGAGGAATCCGACAACGTCCATGGGGAAAATGGGCTGCAGAAATACGCGATCCTAGAAAAGGGGTTCGTGTTTGGCTTGGTACATTCAACACTGCTGAAGAAGCTGCTAGAGCCTATGATCGAGAAGCACGAAAAATCCGTGGCAAAAAAGCCAAAGTCAATTTCCCCAATGATGATGATGATTATTCTTCTTCCATTAAAGTTCGTCGTTACAACAATCCACCGATTAAACCCCCAATCATTCCCCTCTATCAGCAACAACAATACCCAAAAAATCTGAACTTGGAGTTTGGTTATGATCTGAACCAAACTGATACAGTTCATTCTCATGTGGGCGCTATCAACACTGATTCGTTTATCATATCTGGTAGTGATGAAACTTCAGAGGTTGGTAATGGCTACTTGACAATGGAGTTTAATCAGAATGAAAACGGTTATTTTGTTGGTGTTGTTAATGGGAATgagaaagagaaagagaaagagaaagaAAGAGAGATAGAACAACAAGAGCAAGAAGCAGCAAAGAACGAGGTTCAGGAGCTGTCGGATGAATTGATGGCGTACGAGGATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATTTATGCCGCCGCCAAACATTGTTCAAGAAAGTGTGGTTGGTGATTTATGGAGCTTCGATTGA 909 0.3883 MCGGAIIADFIPRRGGRRLTASELWPSSFGQQKDSDFDFSQTGGDQQTPPPPPTLKRSYTPTVSEQVEKPVKKQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNDDDDYSSSIKVRRYNNPPIKPPIIPLYQQQQYPKNLNLEFGYDLNQTDTVHSHVGAINTDSFIISGSDETSEVGNGYLTMEFNQNENGYFVGVVNGNEKEKEKEKEREIEQQEQEAAKNEVQELSDELMAYEDYMKFYQIPYYDGQFMPPPNIVQESVVGDLWSFD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00751 302 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Car04g00751 302 PANTHER EREBP TRANSCRIPTION FACTOR 1 276 - -
Car04g00751 302 Coils Coil 231 270 - -
Car04g00751 302 PANTHER DNA-BINDING DOMAIN 1 276 IPR044808 GO:0003700|GO:0009873
Car04g00751 302 MobiDBLite consensus disorder prediction 25 45 - -
Car04g00751 302 MobiDBLite consensus disorder prediction 25 72 - -
Car04g00751 302 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
Car04g00751 302 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Car04g00751 302 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Car04g00751 302 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Car04g00751 302 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
Car04g00751 302 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
Car04g00751 302 Pfam AP2 domain 79 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00751 Car-Chr4 7399880 7400889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00751 1 136 AP2-EREBP Transcription Factor Family AT3G16770 55.000 1.03e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car04g00751 AP2 8.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00751 K09286 - gmx:100780763 349.747