Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00750 ATGTGTGGCGGTGCTATCATCGCTGACTTCATACCTCGCCGTGGAGGCCGCCGTCTCACGGCCTCTGAACTCTGGCCTTCCTCCTTCGGTCAACAGAAAGACTCAGATTTCGATTTTTCTCAAACAGGTGGTGATCAACAAACACCACCACCACCACCCACTCTCAAAAGATCCTACACTCCCACAGTTAGTGAGCAAGTAGAGAAACCGGTGAAAAAACAGAGGAAAAACCTCTACAGAGGAATCCGACAACGTCCATGGGGAAAATGGGCTGCAGAAATACGCGATCCGAGAAAAGGGGTTCGTGTTTGGCTTGGTACATTCAACACTGCTGAAGAAGCTGCTAGAGCCTATGATCGAGAAGCACGAAAAATCCGTGGCAAAAAAGCCAAAGTCAATTTCCCCAATGACGATGATGATTATTCTTCTTCCATTAAAGTTCGTCGTTACAACAATCCACCGATTAAACCCCCAATCATTCCCCTCTATCAGCAACAACAATACCCAAAAAATCTGAACTTGGAGTTTGGTTATGATCTGAACCAAACTGACACAGTTCATTCTCAAGTGGGTGCTATCAACACTGATTCGTTTATCATATCTGGTAATGATGAAACTTCAGAGGTTGGTAATGGCTACTCGACAATGGAGTTTAATCAGAATGAAAACGGTTATTTTGTTGGTGTTGTTAATgagaatgagaaagagaaagagaaagagaaagaAAGAGAGATAGAACAACAAGAGCAAGAAGCAGCAAAGAGCGAGGTTCAGGAGCTGTCGGATGAATTGATGGCGTACGAGGATTATATGAAGTTTTATCAGATTCCGTACTATGGTGGACAATTTATGCCGTCGCCAAACATTGTTCAAGAAAGTGTGGTTGGTGATTTATGGAGCTTCGATTGA 909 0.4235 MCGGAIIADFIPRRGGRRLTASELWPSSFGQQKDSDFDFSQTGGDQQTPPPPPTLKRSYTPTVSEQVEKPVKKQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNDDDDYSSSIKVRRYNNPPIKPPIIPLYQQQQYPKNLNLEFGYDLNQTDTVHSQVGAINTDSFIISGNDETSEVGNGYSTMEFNQNENGYFVGVVNENEKEKEKEKEREIEQQEQEAAKSEVQELSDELMAYEDYMKFYQIPYYGGQFMPSPNIVQESVVGDLWSFD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00750 302 PANTHER DNA-BINDING DOMAIN 1 276 IPR044808 GO:0003700|GO:0009873
Car04g00750 302 MobiDBLite consensus disorder prediction 24 45 - -
Car04g00750 302 Coils Coil 229 270 - -
Car04g00750 302 MobiDBLite consensus disorder prediction 22 72 - -
Car04g00750 302 Pfam AP2 domain 79 127 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 PANTHER EREBP TRANSCRIPTION FACTOR 1 276 - -
Car04g00750 302 MobiDBLite consensus disorder prediction 233 257 - -
Car04g00750 302 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Car04g00750 302 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
Car04g00750 302 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00750 Car-Chr4 7386604 7388250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00750 1 136 AP2-EREBP Transcription Factor Family AT3G16770 55.000 9.17e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car04g00750 AP2 8.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00750 K09286 - gmx:100780763 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00750 04 7386604 7388250 Car04g00750 04 7386604 7388250 ECH