Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00733 ATGGGAAGAGCTCCTTGTTGTGACAAAGTTGGGTTGAAAAGGGGAAGATGGACGGTTGAAGAAGATGAGATTTTGTCTAAATATATTCAGGCCAATGGAGAAGGTTCTTGGAGGTCATTGCCTAAAAATGCAGGATTATTAAGGTGTGGGAAGAGTTGCAGACTAAGATGGATTAATTATTTGAGAGCTGACATAAAAAGAGGGAACTTTTCTTCTGAGGAGGAAGACACTATTGTGAAGATGCACTCTTCTTATGGCAACAGGTGGTCCATGATAGCTAGCCACTTGCCAGGAAGAACCGACAATGAAATAAAAAACTATTGGAATTCTCACCTCAGTAGAAAAATTTACAGTTTCTCCAAAGAAACAGAGCCAAGAATAGTTGATATTCCTCCTCCTAAACGGAAACGTGGTAGAACAAGTCGTTGGGCAATGAAGAAAAACAAAAGTAGCAAACAAATTACTACAATTGAACACGAAGTTTCAATTCCATCGCGTACTCCGTCACTAGACACTGAAAATGATACGAAAAAATTAATTGATGACGTGGAAGTTAAAAGAACACATGAAGAGGAGGAAGAAACAACGTCGTACGAATTAATGTGTGACGACATTTTAGGACTGAGTGAATTATTAGATGGCATTAATGAAGACAGTGAGGTGTTGCGTTTGGGTCATGATGACATGATGACAATGGAAAATAGTAAAAACTGCTTGCTGGAAGCATGTGGGTCTGTTTTAAATTTAAGTGAAGAGAGAGAAAATAGCAATAGTAAttgtgttgtggtgggtgttggtgttggtgttgatgatgAAAATGAAATAACAACAAATAATGATGGTGTTATGTGTCTTAATAAAATTGTTTCACGCGAGGACACTTTAGAGAGTGGTAGTGTCAATCAAAGTGGGGAATGGTCTTCTATGAATTTGGATTTGGATGATAAGTGGGATTGGGAGAGTGTGATGGAATTTGAttttgataataatagtagtagtagtagtagtggtactaatagGGGGCATGAAGAAAATCTTTTGAATTGGTTATGTGAAGATGATGATTGGGAAAGTGATGATATGTTGGGAGAAATTGATCCTCAGAAGCAAAATGATTTGATTGCTTGGTTTCTCTCTTGA 1140 0.35 MGRAPCCDKVGLKRGRWTVEEDEILSKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADIKRGNFSSEEEDTIVKMHSSYGNRWSMIASHLPGRTDNEIKNYWNSHLSRKIYSFSKETEPRIVDIPPPKRKRGRTSRWAMKKNKSSKQITTIEHEVSIPSRTPSLDTENDTKKLIDDVEVKRTHEEEEETTSYELMCDDILGLSELLDGINEDSEVLRLGHDDMMTMENSKNCLLEACGSVLNLSEERENSNSNCVVVGVGVGVDDENEITTNNDGVMCLNKIVSREDTLESGSVNQSGEWSSMNLDLDDKWDWESVMEFDFDNNSSSSSSGTNRGHEENLLNWLCEDDDWESDDMLGEIDPQKQNDLIAWFLS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00733 379 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Car04g00733 379 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car04g00733 379 CDD SANT 69 112 IPR001005 -
Car04g00733 379 CDD SANT 16 61 IPR001005 -
Car04g00733 379 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 335 - -
Car04g00733 379 Gene3D - 14 66 - -
Car04g00733 379 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car04g00733 379 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car04g00733 379 SMART sant 13 63 IPR001005 -
Car04g00733 379 SMART sant 66 114 IPR001005 -
Car04g00733 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Car04g00733 379 PANTHER MYB TRANSCRIPTION FACTOR 2 335 - -
Car04g00733 379 Gene3D - 68 160 - -
Car04g00733 379 MobiDBLite consensus disorder prediction 127 151 - -
Car04g00733 379 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Car04g00733 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00733 Car-Chr4 7216924 7223812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00733 1 146 MYB Transcription Factor Family AT2G47460 69.811 1.50e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car04g00733 Myb_DNA-binding 4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00733 K09422 - gmx:100814275 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00733 04 7216924 7223812 Car04g00733 04 7216924 7223812 ECH
Car03g02800 03 73428815 73432876 Car04g00733 04 7216924 7223812 PCT