Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00723 ATGGGAGAAGTTGTATTGTTGGTTGATGATTTAAAATCATTTTCTGGGTTTCCTCGTTGTAGAATATGTCACGAAGAAGAATTTGAGAGCTTCAAAAGCTTAGAAGCTCCTTGTGCTTGTTCTGGTACGGTTAAGTTTGCTCATAGAGATTGCATTCAGACATGGTGTAATGAAAAAGGAAATACTACTTGTGAAATTTGTCTACAGCAATATGAACCTGGATATACAGCACCGCCAAAGAAATCTCAAAAATCTGATGCAGCATTGAGCATTAGAGAGAGCCTTGAAATATCAAGGGGGGAGGAAGAGACGTTAAACAGAAGAATAGTAGTTGGTATAGTTGAAGTTGAAGTTGAAGCTGTAACAACAGACAACAATTACTCTCAATGCACAGATGCTGCAGATAGAACCACGTCTTGTTTTCGATCACTCGCAATTGCTTTTACTTTCATATTACTTTTAAGACATCTTTTTGCTTTGCTTACAAATGGAATGGAAGAATATCCCTTTACAATTCTTACAATCTTTATGCTAAGGGCCATTGGAATTATTATACCTATGTGCATAATTATTAGGACTATGGGAGCCTTTCATAAAAGTATCCAGCGTCATTATAATCAGGATCCTGATGATGACTCATCAATTTCTGATGGAGATGATGAAGACAATGAGACACCACATATTGCAATTTTAAGACACTCACATTAG 708 0.3644 MGEVVLLVDDLKSFSGFPRCRICHEEEFESFKSLEAPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQQYEPGYTAPPKKSQKSDAALSIRESLEISRGEEETLNRRIVVGIVEVEVEAVTTDNNYSQCTDAADRTTSCFRSLAIAFTFILLLRHLFALLTNGMEEYPFTILTIFMLRAIGIIIPMCIIIRTMGAFHKSIQRHYNQDPDDDSSISDGDDEDNETPHIAILRHSH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00723 235 SMART ringv_2 19 68 IPR011016 GO:0008270
Car04g00723 235 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Car04g00723 235 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 233 IPR033275 -
Car04g00723 235 SUPERFAMILY RING/U-box 18 72 - -
Car04g00723 235 CDD RING_CH-C4HC3_MARCH 20 67 - -
Car04g00723 235 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 233 - -
Car04g00723 235 Pfam Protein of unknown function (DUF3675) 73 194 IPR022143 -
Car04g00723 235 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Car04g00723 235 MobiDBLite consensus disorder prediction 205 225 - -
Car04g00723 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 77 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00723 Car-Chr4 7104936 7108139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00723 20 115 C3H Transcription Factor Family AT2G37950 30.928 3.27e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00723 - - gmx:100797029 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00723 04 7104936 7108139 Car04g00723 04 7104936 7108139 ECH
Car03g02807 03 73510777 73514332 Car04g00723 04 7104936 7108139 PCT