Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00722 ATGGGATTGCTTCGACCTTCATCTTTCATAATCTTGCTGGCATATGGTGTGCTAATAGTGTTGGCCTCATTGACACCGTGTTGGTATGTCATGGATACACATATTCAGAAAAGTGTAGATTTGTTATCGGAAAATATTGTGTCTCAATTGCAATCCGAAATTGAGTACTCTACTGAATTGTTAAACTCAATGAAATCGTCATCAGCAAATTTTACTACATTATTGAATTCAACACTTAATTCTACCAAAATCTCTTTTTCTAATGTTGACACCAAGGTGGCTCCATTATTATTTCAAGCATTGGTGACAATTCCTTACCTAACACAAATCTCATACATTGGAATGGAAGGTCTTTTTTTCACATATTACAATGTTGATGGTCAAACTCTAGCAATGTACTCTAACTCATCTTCTAATGGGAGTGCCTCAAATAAAACTTTATATTATATTCAACCCGTGAATAGTGAAAATGGAGAAGTTTATGGGGAAGCAATAATATATAACAACACTATCAATGCAAGTTGGATAAATGGAACAAAAAATATTTCACATGATTTTACATCATTGGGAACAAAGTGGAACCATGACTATGATCTTTTGTTCATCAATTCAGCTAGAATCGAAATAGGAGTGATCTCTCTTGGGTTTTCAACAAATGCGATAATGGATTATATAAGTCGCATTGATGATCGCCAAGGGACAAGATGGTATTTGATTACCAAAGATGGAAAAGTTATTGTACAAGGTTTTCAAAATATTAGTTTGATGATTAATAATGATGATAGTGTTTCTTTTCAACATGTTGATGCTAATGGAGTTTTAATAAGGAATGAGGGAAATGTCTCTTGCAAGGATGAAGTTGATGGTTCTACTTTGAATCTTGAAGATACTCAATATTTGATTCATTGCTACCCCATTGATCTAATGGGAATCAAATCGGTGTATGTGTCGGCTATCCCACAAGATGGATTTCTGAGCTTTGATCTAACTTATAAAGAAAAGGGATTGATACTGGTGATTGTAATGATAGTGATGATATTTATGGCTGTAATGAGTTGTGTATTCATGAATGTTGGAGTTACAAGGAGAGAAATGCATTTGTGTGCTTCACTCATAAAACAAATGGAAGCCACTGAACAAGCTGAGAGAAAAAATATGAATAAGAGTCTTGCTCTTGCTAGTGCTAGCCATGATGTTCGTGCTTATCTTGCTGGCCTTGTTGGTTTGATAGAAATGTCTTATAAATTAGTTGTCTCTGCTTCAGATTTGGACACTAATTTAAAACCACATTCAGAATTGGAGACCAATTTGAAACAAATGGAGAATTGTACCCAAGACTTGTTAGGACTGTTAAATTCTATACTTGACACAAGCAAAATTGAGGCAGGAAAAATGCAACTTGATGAAGAGGAATTTGATATATCATATCTCCTTGAAGATGTTGTTGATTTGTACCATCCAATGGCTATGAAAAAAGGTGTAGATCTTATATTGGACCCTTGTAATGGTTCTGTTATCAAGTATTCACGTGTCAAAGGTGATAGAAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTCACTGATGAAGGACACATAACAGTTAGAGCATGGACTCAGAAGGCAAAATTGCAAAATTCAATAATGAAGAGTAGTAAACAATTTGGTTTTATGAAACATTTGTCATGTTTGTTTAAGAAGGTAAATAATAAAGAATGTGAGGATATAGAAGCTGTGAATTCAATTCAACAAGATCCATGTTTTATGGATTTTATATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAAGAGAATTATAAGTCAGTGTTTGAGAATTATGTTCAAGTAAAAAAAAATGCTCTTGGCCAAGTTGGAACTGGTTTGGGACTTGGGATTGTGCAATCATTGGTACGTTTGATGCATGGAGATATTGGAATTGTGGACAAAGAAGTTGGCGAAAAAGGAACATGCTTCAAATTCAATGTGCTCCTCACTTTATGTGAAACTGAAACAGTGACTTATGGTTTAAGGGAAGGTCTTGACTATGGATCAACCTCATGGGATAGAAACCAAATTCTAACAAAAACCATTCACACTGCTACTTCTGCAGGTTCAAGCTTTTGTTCTTTGAGTCCAAAGTTACAACAATTTTGCAACTCTCCTAGGCCAGAACCATCACATGTTGTTCTTTACATCGGTGACGAAGAGCGAAGAAGGACTTCACAATTGTTCATAGAGAGCTTAGGAATTAAAGTTGAGGTTGTGAAGCATAGGAAACATCTAATTCATGTTCTCAAGAAGATCAAACAAAAGGTTCACCAAATAAGTGACCAAACTTCACCAGAATCTTCAGATTTGAGTTCTAGGTGGACATCTTATAATTCTTATTCTACTAGAGCCACAAGAGTTCCTTTTAGAGCTATGGATGGAACTACTGAATATGTTTCTTCAGTGTTCAAGAAGACAAATATTGGAGCTGCACCAGGTTTTGTTCTCATTATCATTGATTCAAATGCAGAACCATTTTCTAAGCTTTGTAAGATTGTGTCATATTTCAAGAAAGATCTTATAAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAATGTTGATTTCAAAAAACTTGATCAAGATGACATTGTGATATCAAAGCCATTTCATGGTAGTAGAATGTTCCAAGTGATTAAGCTTCTTCCTGAGTTTGGTGGGAATTGGAGAAGCAATTCTAGTAGTAAAGTTATAAGAGAGTTTATATCACAAGCATCTCTTAATGATGAAAGACTATGTGTAAATGTGGAACAATGTTGCAAGGGGAATCAGAAAATTAAGGCAAAAAAAAATTCTGGTAATCAAGGTGAAATACAAGAATGTGGAGGAGATTCAAGCTATAATCAACCATTAAGTGGTAAGAAATTTTTGGTGGTTGATGATAGTGACATATTGTGCAAGATAGCTAAGGCTACTTTGATTTCTCTTGGTGTGACTAGTATTGATCAATGTGAGAATGGTGAAGAGGCTGTGAGACTAGTTGATGAGGGTCTAATTGAGAATTCTCCTTATGATTACATCTTAATGGATTGCCAGATGCCAGTGATGGATGGATTTGAGGCAACAAGGAAGATAAGAGAGATGGAGAAACATTATGGTCTTCACATTTGTATCATTGCATTGTCTGCTGAAATTGACAAAAGGACAACAGAGACTGGAATGGATTTCCATATAACCAAGCCCATCAAGAGAGACCATTTACTCAAAGCTATTGCATATATAGAAAATAATCACATAATGTAA 3318 0.3487 MGLLRPSSFIILLAYGVLIVLASLTPCWYVMDTHIQKSVDLLSENIVSQLQSEIEYSTELLNSMKSSSANFTTLLNSTLNSTKISFSNVDTKVAPLLFQALVTIPYLTQISYIGMEGLFFTYYNVDGQTLAMYSNSSSNGSASNKTLYYIQPVNSENGEVYGEAIIYNNTINASWINGTKNISHDFTSLGTKWNHDYDLLFINSARIEIGVISLGFSTNAIMDYISRIDDRQGTRWYLITKDGKVIVQGFQNISLMINNDDSVSFQHVDANGVLIRNEGNVSCKDEVDGSTLNLEDTQYLIHCYPIDLMGIKSVYVSAIPQDGFLSFDLTYKEKGLILVIVMIVMIFMAVMSCVFMNVGVTRREMHLCASLIKQMEATEQAERKNMNKSLALASASHDVRAYLAGLVGLIEMSYKLVVSASDLDTNLKPHSELETNLKQMENCTQDLLGLLNSILDTSKIEAGKMQLDEEEFDISYLLEDVVDLYHPMAMKKGVDLILDPCNGSVIKYSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQNSIMKSSKQFGFMKHLSCLFKKVNNKECEDIEAVNSIQQDPCFMDFIFEVDDTGKGIPKENYKSVFENYVQVKKNALGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGEKGTCFKFNVLLTLCETETVTYGLREGLDYGSTSWDRNQILTKTIHTATSAGSSFCSLSPKLQQFCNSPRPEPSHVVLYIGDEERRRTSQLFIESLGIKVEVVKHRKHLIHVLKKIKQKVHQISDQTSPESSDLSSRWTSYNSYSTRATRVPFRAMDGTTEYVSSVFKKTNIGAAPGFVLIIIDSNAEPFSKLCKIVSYFKKDLINPSKVVWLEKPFESNVDFKKLDQDDIVISKPFHGSRMFQVIKLLPEFGGNWRSNSSSKVIREFISQASLNDERLCVNVEQCCKGNQKIKAKKNSGNQGEIQECGGDSSYNQPLSGKKFLVVDDSDILCKIAKATLISLGVTSIDQCENGEEAVRLVDEGLIENSPYDYILMDCQMPVMDGFEATRKIREMEKHYGLHICIIALSAEIDKRTTETGMDFHITKPIKRDHLLKAIAYIENNHIM 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00722 1105 CDD HisKA 385 459 IPR003661 GO:0000155|GO:0007165
Car04g00722 1105 ProSiteProfiles Histidine kinase domain profile. 394 672 IPR005467 -
Car04g00722 1105 Pfam Response regulator receiver domain 982 1096 IPR001789 GO:0000160
Car04g00722 1105 SUPERFAMILY CheY-like 976 1098 IPR011006 -
Car04g00722 1105 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 670 IPR003594 -
Car04g00722 1105 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 375 465 IPR036097 GO:0000155|GO:0007165
Car04g00722 1105 SMART HKATPase_4 513 672 IPR003594 -
Car04g00722 1105 PRINTS Bacterial sensor protein C-terminal signature 596 610 IPR004358 GO:0016310|GO:0016772
Car04g00722 1105 PRINTS Bacterial sensor protein C-terminal signature 614 624 IPR004358 GO:0016310|GO:0016772
Car04g00722 1105 PRINTS Bacterial sensor protein C-terminal signature 630 648 IPR004358 GO:0016310|GO:0016772
Car04g00722 1105 PANTHER HISTIDINE KINASE CKI1-LIKE 35 1097 - -
Car04g00722 1105 SMART HisKA_10 387 463 IPR003661 GO:0000155|GO:0007165
Car04g00722 1105 PANTHER TWO-COMPONENT HISTIDINE KINASE 35 1097 - -
Car04g00722 1105 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 452 667 IPR036890 -
Car04g00722 1105 SMART REC_2 979 1096 IPR001789 GO:0000160
Car04g00722 1105 Gene3D - 962 1103 - -
Car04g00722 1105 ProSiteProfiles Response regulatory domain profile. 980 1100 IPR001789 GO:0000160
Car04g00722 1105 Gene3D - 374 464 - -
Car04g00722 1105 CDD REC_hyHK_CKI1_RcsC-like 981 1096 - -
Car04g00722 1105 Gene3D - 465 676 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00722 Car-Chr4 7092017 7100058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00722 5 1103 Histidine Kinase Gene Family AT2G47430 37.737 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car04g00722 HATPase_c 2.6e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00722 - - cam:101504256 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00722 04 7092017 7100058 Car04g00722 04 7092017 7100058 ECH