Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00712 ATGCCGAACCTCATGTTTTCTATCTCTTTAATCGGTGGATTGGAAAAGTTTCAGTGCATATTGCTGAAAACATTGCTTGTGTTATTATCTACTACGGTGTTTTTAGTTGATTGTGGTGCATATGATAGAATGCTAGAAGCTTCTTTATTCTCTTCAGTTACACCAATTCCATCACGTGCACCTTCTCATTCATCTATTACCCCTATGCATTCTATTTCTCATGCAGTTCCTTCTCTTATGGCTCACCCACCATTGTCCCCTTATGTTTCCAATTGTTGTAAAAAAGGAATGGTTTTGAAACGAGGTAGTGAGGGCTGCCACTGTGTTTATCCTGTAAAGCTAGACCTTCTTCTTTTGAATGTCTCTCAGAATCCAGACTGGAATATTTTTCTCGATGAATTGGCCGCACTATTGGGGCTTCGAGCTACACAAATTGAATTGATAAATTTTTATGTACTCGGCTTATCGACGTTGAATATATCGATGTATATTACTCCACAAAAAGAGATCAGTTTCTCTGCCAATGAAGCATCTAAATTAAACTCTTCCCTTTTGTTTCATAAGGTTCGACTTGACAGTAGATTCGTGGGTGACTACAGGGTTCTCAATATGACCTGGTTTAAACCTCTACCTCCTTCTCAAGCTCCTACTTTTGCTGCATCAGCTGTGAAAACTCCTGAGAGACAAAAACCTACAGCTACATCATCGAGTACTTCAGACAGGGAAAGGCATTCAAATTTGCTTCTTATCCTTGGAATTGTTACTGGAATACTCATCACTTCCATTATATGTGTACTTATACTTTGTCTATGCACACTGAGGCCAAAAAGGAAAACACCTCCTACAGAAACTGGCAAGTATTCTAAAAAGCCAAAGATAGAACATGCAGTTTCATCTGCTGTGTCACTTCCGCGCCCAACCAGTACACGTTTTATTTCTTACGAAGATCTTAGAGAAGCAACAAACAATTTTGAATCAGCAAGCATACTTGGAGAAGGGGGTTTTGGTAAAGTTTTTAAAGGTGTCTTGAATGATGGAACTGCTGTTGCAATTAAGAGGCTTACTAGTGGCGGGCATCAGGGTGACAAAGAGTTTTTGGTTGAGGTTGATATGCTTAGCCGGTTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGCAATCGCGACTCGTCACAAAACCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGACCTGGCTTCATGGTCCCTTGGGAGTAAATTGCCCtttggattgggacaccaggatgaagattgcacttgatgctgcaagaggacttgcttacctgcatgaagattcacaaccatgtgtcatacacagagattttaaggcatctaatatattgcttgagaacaactttcatgctaaagttgctgattttggTCTAGCTAAACAAGCGCCCGAAGGCAGGGCTAATTACCTGTCTACACGTGTCATGGGCACATTTGGGTATGTAGCACCTGAGTATGCTATGACTGGACACCTACTCGTGAAAAGTGATGTTTATAGCTACGGGGTTGTGTTGCTAGAACTGTTGACCGGAAGGAAACCTGTGGATATGTCACAGCCAACGGGACAAGAAAACCTTGTAACTTGGGCAAGGCCGATTCTTAGAGATAAGGAGCGGTTAGAAGAACTTGCTGATCCAAGGCTTGGGGGAAAGTATCCAAAGGAAGATTTTCTCCGCGTTTGCACTATTGCTGCAGCTTGTGTTGCACCTGAAGCAAACCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGTGTCACAGAAAATCATGATACCACATTACCCTCATCAAATACCATGCCCAACATGAGACAGTTTTCTACCACTTATGAGTCTGATGGGACATCTTCAATGTTTTCCTCTGGTCCTTACTCTGGTCTAAGTCCCTTTGACTATGACAACATTTCTAGGACAGCTGTTTTTTCTGAAGATCTTCATGAAGGACGATGA 2007 0.3861 MPNLMFSISLIGGLEKFQCILLKTLLVLLSTTVFLVDCGAYDRMLEASLFSSVTPIPSRAPSHSSITPMHSISHAVPSLMAHPPLSPYVSNCCKKGMVLKRGSEGCHCVYPVKLDLLLLNVSQNPDWNIFLDELAALLGLRATQIELINFYVLGLSTLNISMYITPQKEISFSANEASKLNSSLLFHKVRLDSRFVGDYRVLNMTWFKPLPPSQAPTFAASAVKTPERQKPTATSSSTSDRERHSNLLLILGIVTGILITSIICVLILCLCTLRPKRKTPPTETGKYSKKPKIEHAVSSAVSLPRPTSTRFISYEDLREATNNFESASILGEGGFGKVFKGVLNDGTAVAIKRLTSGGHQGDKEFLVEVDMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLETWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKERLEELADPRLGGKYPKEDFLRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVTENHDTTLPSSNTMPNMRQFSTTYESDGTSSMFSSGPYSGLSPFDYDNISRTAVFSEDLHEGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00712 668 SUPERFAMILY Protein kinase-like (PK-like) 300 601 IPR011009 -
Car04g00712 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 56 668 - -
Car04g00712 668 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Car04g00712 668 ProSiteProfiles Protein kinase domain profile. 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00712 668 PANTHER OS01G0750732 PROTEIN 56 668 - -
Car04g00712 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Car04g00712 668 Gene3D Phosphorylase Kinase; domain 1 284 401 - -
Car04g00712 668 MobiDBLite consensus disorder prediction 610 637 - -
Car04g00712 668 Gene3D Transferase(Phosphotransferase) domain 1 402 621 - -
Car04g00712 668 MobiDBLite consensus disorder prediction 220 239 - -
Car04g00712 668 Pfam Protein tyrosine and serine/threonine kinase 327 599 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00712 Car-Chr4 6991070 6995069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00712 64 668 Receptor kinase-like Gene Family AT4G02010 72.112 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car04g00712 PK_Tyr_Ser-Thr 7.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00712 - - gmx:100792818 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00712 04 6991070 6995069 Car04g00712 04 6991070 6995069 ECH
Car03g02822 03 73604730 73611295 Car04g00712 04 6991070 6995069 PCT