Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00708 ATGGAGAAGAAGGAGAATATGGGGGTGAGTGTGAAGGGTGAGGATGTTGTTGATTCTTCGTCATATTTGGTAAACAGTTATAATCAATTTTCAAGCGTGTTTGATTTCTGTGAGGTGGAAAAAAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTTCAAAACTATAGTCCTCTGCTTGATTTACCGCAACTTTCAACCATGTCTGTGATGACTCATGATACACTTAAAGCTCCATCTGCAGATACTGGAAAAGAGTATTCTGAGGTTTTGAATCAACAACCTGCAACTCCTAACTCTTGTTCGATTTCATCCGCATCTAGTGAAGCACTCAATGATGAACACAACAAGACTCTTCTTGACCAACATGAAGATGAAGAGGATGAAAAGCAAAAGATAAATAAACAGTTGAAGACAAAGAAGACAAATCAGAAGAGACAGAgagaaccaagattcgcgttcatgacgaaaagcgaggtggatcatttggaagatgggtacagatggagaaagtacggtcaaaaagctgtgaaaaatagcccctttccaaggagttactatcgttgcaccactgtttcatgtaatgtgaagaaacgtgtggaacgttcttttactgatccaaccattgtagtcacaacttatgaaggacaacacaCGCATCAAAGTCCAGCTATGTGCCGCTCCGGCTTCGCCGGAGCTCAAATACCACCGCCTGCTGGTGGTCGATTTTCTACTAACTTTGGTTCAGTTTTGCAAGGAAACTTCTTatcatcatcacagtttcagcagcaacattatcaacatcaacaACTACTTGTTAATACATTGTCTTCTTTGGCTCTACCTTATAACAATTCTTCTTCGTCATCAAAGAATTCAACTTTTACTCAAGAGAGTTCATTTCTTAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 960 0.2906 MEKKENMGVSVKGEDVVDSSSYLVNSYNQFSSVFDFCEVEKSSLGFMELLGVQNYSPLLDLPQLSTMSVMTHDTLKAPSADTGKEYSEVLNQQPATPNSCSISSASSEALNDEHNKTLLDQHEDEEDEKQKINKQLKTKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSFTDPTIVVTTYEGQHTHQSPAMCRSGFAGAQIPPPAGGRFSTNFGSVLQGNFLSSSQFQQQHYQHQQLLVNTLSSLALPYNNSSSSSKNSTFTQESSFLRDHGLLQDVVPSHMLKEE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00708 319 PIRSF WRKY_txn_fact_IIc 1 319 IPR017396 GO:0003700
Car04g00708 319 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g00708 319 PANTHER WRKY TRANSCRIPTION FACTOR 1 310 - -
Car04g00708 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 310 IPR044810 GO:0003700
Car04g00708 319 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g00708 319 MobiDBLite consensus disorder prediction 119 135 - -
Car04g00708 319 MobiDBLite consensus disorder prediction 85 107 - -
Car04g00708 319 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g00708 319 Coils Coil 115 142 - -
Car04g00708 319 SUPERFAMILY WRKY DNA-binding domain 154 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car04g00708 319 MobiDBLite consensus disorder prediction 119 146 - -
Car04g00708 319 MobiDBLite consensus disorder prediction 78 107 - -
Car04g00708 319 Gene3D WRKY domain 146 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00708 Car-Chr4 6959399 6961336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00708 32 319 WRKY Transcription Factor Family AT2G47260 50.311 5.96e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car04g00708 WRKY 8.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00708 - - aprc:113872234 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00708 04 6959399 6961336 Car04g00708 04 6959399 6961336 ECH
Car03g02827 03 73664001 73666145 Car04g00708 04 6959399 6961336 PCT