Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00701 ATGGATGTGAAAGATATTTTAGGATTGCCCAATATTTCCATCCCAGTTCATGAGAAGAACTCTCCACCTCAGAAAGATTCTCAGAGAAAACCTGATGGCATTTCTCGGGAGGTTTATGCACTTACGGGTGGTTTGGCACCTCTTATGCCTGCAGTTGATTTGTCTCTGTTAAAACAAAGGCCTCCCTCGGATGGAAAGGTCATCTGGCAATGGCTTCCTTTCACAAACTCTGCTCGTAAAGATAATCTTCGGCTTTACCATTGGGTCCAAGTTGTAAATGATGCTCCACCAACAGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTTGACACAACAAGATACACAGATGAAGAGTATGAGAAATATTTGGCAAATCCTAAATGGACCAAGGAGGAAACGGATCAACTGTTTGATTTGTGTGAGAGATTTAATCTCCGATTCATTGTTATAGCTGATAGATTTCCTTCATCTAGAACTGTTGAAGAATTAAAGGACCGATATTATAGTGTATCCCAGGCTATATTAATTGCTAGGAATCCATCTTCTGGAGATGTTGCAGTGCATCCGCTCGTTAAGGTATGGTATTCACTATTGTATTATATGCAGGTGCTTGCTGAAGCAAAAAGAATTGTTGAATCACGCATAATGACCAAGGTTGCCAGAGAGTCGGAGTTGGTCGTTGCTTCAAATGCTGGTGCAGACATTACCGAGAGGGCCAACCCAGGTGAAACTGTATCTCCATCAAATATGCATCTTCCACCAACAGTTGTGCCTTCCCCAATAACAACAGATAATGCATCTACTATAGCTTCTCTCCGCATGCTTCATGTGTATTTAAGAACCTACGCACTTGAACAAATGGTGCAATCTGCAAGCTCATCAGCTGGACTTCGGACTATCAAACGCATTGATCAAACTTTGCAGGAACTTGGGGTTAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTCTGCTGAATCTTCAGAAACAGCTGCAAAATAAGGAGGCTGAAGGTTCAACTTTTCGTGATGGGTCACACTGTGAAACAACAGGAGCACCAAAGCATTTGCATCGTGGTGGCGATCAGGATCAGACATTTGTTCCGGATACCACTAGTTCCGGGGAGAAAACTAAAGGCCTCAGATCTTTAGCTTCCCTAGTGGCAACTGGAATGGATGTTATGATTTGTAGTGTTCTTGTGATAGGAAAAATGAATCTTATAGTGAGCAGCAGTGAACTCTAA 1284 0.419 MDVKDILGLPNISIPVHEKNSPPQKDSQRKPDGISREVYALTGGLAPLMPAVDLSLLKQRPPSDGKVIWQWLPFTNSARKDNLRLYHWVQVVNDAPPTGDYSFAKYNKSVDTTRYTDEEYEKYLANPKWTKEETDQLFDLCERFNLRFIVIADRFPSSRTVEELKDRYYSVSQAILIARNPSSGDVAVHPLVKVWYSLLYYMQVLAEAKRIVESRIMTKVARESELVVASNAGADITERANPGETVSPSNMHLPPTVVPSPITTDNASTIASLRMLHVYLRTYALEQMVQSASSSAGLRTIKRIDQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQNKEAEGSTFRDGSHCETTGAPKHLHRGGDQDQTFVPDTTSSGEKTKGLRSLASLVATGMDVMICSVLVIGKMNLIVSSSEL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00701 427 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 203 368 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Car04g00701 427 MobiDBLite consensus disorder prediction 362 376 - -
Car04g00701 427 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Car04g00701 427 Coils Coil 331 351 - -
Car04g00701 427 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 197 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Car04g00701 427 CDD SANT_DMAP1_like 129 171 - -
Car04g00701 427 Gene3D - 98 184 - -
Car04g00701 427 MobiDBLite consensus disorder prediction 351 390 - -
Car04g00701 427 SMART sant 125 174 IPR001005 -
Car04g00701 427 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 294 357 IPR008468 GO:0005634|GO:0045892
Car04g00701 427 PANTHER BNAA04G26950D PROTEIN 203 368 - -
Car04g00701 427 PANTHER BNAA04G26950D PROTEIN 2 197 - -
Car04g00701 427 SUPERFAMILY Homeodomain-like 126 172 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00701 Car-Chr4 6877641 6885243 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car04g00701 DMAP1 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00701 K11324 - gmx:100818926 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00701 04 6877641 6885243 Car04g00701 04 6877641 6885243 ECH