Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00699 ATGGTTCGAATAACCCATTTCCAATTCATTTTATTTCTTCTTTCATTGTTATACTTCAATTGCAGTTCAGAAATGCAGGGAGATTTTGACAAGTGGATATCTTGGAACGTGAAGGATTACCAGAAAAAGACAATTTTGGAAAACAAATTGAAAGTACTCAGTGCAACTGAACAGGGTCTTGATTTGAAGCTGAGGCAAGCTGAGAGTAAAATAGTTAGAATCACAGTTAACCAAAATGGTACTGCTGATTTCAAAACCATTACAGAAGCTATTAATAGCATTCCACTAAACAACACTAGAAGATATATTGTGTCCATTGCACCGGGTACTTACAGGGAGAAAATTACAATCCCCAAAAAAAAGCCGTTCATAACATTCTTAGGGGACGCGATGGACCGACCAACTATTACTGGAAATGATACAAAGGGTATGATTGGAAGAGATGGGACTGAATTGAAGACATTCAACACTTCAACAGTTGCTGTGGAAGCTCGGTATTTTATTGCCATCAACATTAATTTTGAGAACACTGCTAGGCATGACAATGCATCAAAAGAGGAACAAGGTGTTGCGCTTCGTGTGTCTGCAAACAAAACCGCTTTTTATAATTGCTCTTTCTATGGGGCTCAAGACACTTTATATGATCACAAAGGCCTTCACTACTTCAAAAATTGCTTAATTAAAGGCACTGTTGATTTCATCTTCGGCTATGGGAGGTCCTTTTACGAGAATTGCCATATACACAGCACAACGAAGACGAAGTCCTACATCACTGCTCAAAGGCGTTCGAAGAATACGTCAATGGCGAGTGGATTTTCCTTTAAAAATAGCAAGGTAACAGGTAGTGGACAGACTTATCTTGGAAGACCATGGGGAAATTATTCAAGAGTTGTTTTCTCTTACACCTACATGGACAATACTATTCTTCCCGAAGGATGGTCTGATTGGAATCACGAACACCGTTACTTGAATGCATATTATGGAGAGTACAAGTGTAGTGGGCCTGGCTCCAACTTATCGGAAAGAGTTCCGTGGGCTCGGAATCTAACGGACCAAGAGGCCCAGCCTTTTCTTGGGACCCATTTCATTGAAGGCAACACTTGGCTCATTAGCCCTTCTAATTCATCATCCACCTACTTCTGA 1143 0.4024 MVRITHFQFILFLLSLLYFNCSSEMQGDFDKWISWNVKDYQKKTILENKLKVLSATEQGLDLKLRQAESKIVRITVNQNGTADFKTITEAINSIPLNNTRRYIVSIAPGTYREKITIPKKKPFITFLGDAMDRPTITGNDTKGMIGRDGTELKTFNTSTVAVEARYFIAININFENTARHDNASKEEQGVALRVSANKTAFYNCSFYGAQDTLYDHKGLHYFKNCLIKGTVDFIFGYGRSFYENCHIHSTTKTKSYITAQRRSKNTSMASGFSFKNSKVTGSGQTYLGRPWGNYSRVVFSYTYMDNTILPEGWSDWNHEHRYLNAYYGEYKCSGPGSNLSERVPWARNLTDQEAQPFLGTHFIEGNTWLISPSNSSSTYF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00699 380 Gene3D - 70 375 IPR012334 -
Car04g00699 380 SUPERFAMILY Pectin lyase-like 74 369 IPR011050 -
Car04g00699 380 ProSitePatterns Pectinesterase signature 2. 227 236 IPR033131 -
Car04g00699 380 Pfam Pectinesterase 74 366 IPR000070 GO:0030599|GO:0042545
Car04g00699 380 PANTHER PECTINESTERASE 20 370 - -
Car04g00699 380 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00699 Car-Chr4 6849749 6851953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00699 74 375 Carbohydrate Esterase AT5G47500 43.421 8.86e-88 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00699 04 6849749 6851953 Car04g00699 04 6849749 6851953 ECH
Car03g02542 03 71322946 71325492 Car04g00699 04 6849749 6851953 PCT