Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00693 ATGGCATCAGCGGGTGTAGCACCTGCTTCTGGGTTAATAGATGTAAATACAAGTTCAGTTGTTGCTGCTGATAGGTTACCTGATGAAATTCATGGCATGAAAATTAAGGATGACAAGGAAATGGAAGCAAATGTGGTTGATGGAAATAGTACCGAAGCAGGACATGTAATTGTAACTATCATTGGGGGTAAAAATGGCCAGCCAAAGCAGACAATAAGCTACATGGCTGAGCGTGCTGTTGGACATGGATCATTTGGTGTCGTTTTCCAGGCAAAATGCTTGGAGACAGGTGAAACTGTGGCTATCAAGAAGGTTCTTCAAGACAAGAGGTACAAGAACCGGGAATTGCAAACAATGCGCCTTCTGGATCACCCCAATGTTGTTACTTTGAAGCATTGTTTCTTTTCAACAACCGAAAAAGATGAGCTCTACCTTAACTTGGTACTTGAGTATGTTCCTGAGACTGTCTATCGGGTGATCAGACACTACAGCAAAATGAATCAGAGGATGCCATTGATATATGTAAAACTTTATTTTTACCAGATATGTAGAGCACTAGCTTATATTCATAACTGTGTTGGAGTGTCTCATAGGGACATAAAACCTCAAAATTTACTGGTCAATCCTCACACCCACCAGCTGAAGCTTTGTGACTTTGGGAGTGCAAAAGTCCTGGTCAAAGGTGAACCAAACATATCGTACATCTGTTCTAGGTATTATAGAGCTCCTGAGCTTATATTTGGGGCAACCGAGTACACCACAGCCATTGACATTTGGTCAGCTGGCTGTGTACTTGGAGAACTATTGCTTGGCCAGCCTCTATTTCCTGGTGCGAGTGGAGTAGATCAGCTGGTTGAAATTATCAAGGTTTTAGGTACCCCAACAAGAGAAGAAATAAAGTGTATGAATCCTAACTACACCGAGTTCAAATTCCCACAAATCAAAGCACATCCATGGCATAAGATCTTTCGTAAGCGTATGCCACCAGAAGCTGTGGATCTCGTCTCAAGACTACTGCAATACTCTCCTAATCTTCGAAGCACAGCTTTGGAGGCCCTGGTTCATCCATTCTTAGATGAATTGCGTGATCCAAATACCCGCTTACCAAATGGGCGTCATCTTCCACCTTTATTTAACTTCAAAGCAAATGAGCTTAAAGGAGTCTCTGCTGAAATGCTGGTGAAGCTGATTCCCTTGCATGCAAGAAAGCAGTGTGCCTTGTTTGTGTCATAG 1233 0.4258 MASAGVAPASGLIDVNTSSVVAADRLPDEIHGMKIKDDKEMEANVVDGNSTEAGHVIVTIIGGKNGQPKQTISYMAERAVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEYVPETVYRVIRHYSKMNQRMPLIYVKLYFYQICRALAYIHNCVGVSHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGASGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFRKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFLDELRDPNTRLPNGRHLPPLFNFKANELKGVSAEMLVKLIPLHARKQCALFVS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00693 410 SMART serkin_6 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00693 410 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 408 - -
Car04g00693 410 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00693 410 SUPERFAMILY Protein kinase-like (PK-like) 73 382 IPR011009 -
Car04g00693 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Car04g00693 410 Gene3D Transferase(Phosphotransferase) domain 1 154 402 - -
Car04g00693 410 CDD STKc_GSK3 69 361 IPR039192 -
Car04g00693 410 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00693 410 Gene3D Phosphorylase Kinase; domain 1 59 153 - -
Car04g00693 410 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Car04g00693 410 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00693 Car-Chr4 6791854 6794819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00693 78 363 MAP Kinase Gene Family AT3G59790 35.374 2.69e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Car04g00693 Pkinase 2.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00693 K00924 - gmx:100788046 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00693 04 6791854 6794819 Car04g00693 04 6791854 6794819 ECH