Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00685 ATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAGTACCACAAGGCTGCCGAAAGTGGTGGACCATATGTTGTAAAAAATCCAGCAGGGAATGATGGAAATTATCATGCTTCTGAGACTGCAAAACAGGGGGCTCAGGCTGTTAAAGTGCAGCCCATTGAAGTTCCTGAGATACAGGCAGATGAACTGAAAGAAGTTACTGATAACTTTGGACAAGATTCTCTTATTGGAGAGGGATCCTATGGAAGAGTATACTATGGAGTTCTTAAAAATGGCCCGGCTGCAGCAATCAAGAAGTTAGATGCCAGTAAACAGCCCGACGAGGAATTCTTGGCCCAGGTTTCAATGGTATCAAGGCTGAAGCACGAAAATTTTGTCCAGTTGCTTGGATATTGCGTTGATGGAAACTCCCGTATTCTTGCTTATGAATTTGCATCTAATGGGTCTCTTCATGACATTTTACATGGCAGAAAAGGGGTTAAAGGAGCACAACCTGGTCCAGTTTTGACATGGGCGCAGAGAGTAAAAATTGCTGTTGGGGCTGCAAGAGGGCTTGAATACTTGCATGAGAAGGCTGATCCCCATATTATTCACCGGGACATCAAGTCAAGCAATGTGCTGATATTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCAGACATGGCTGCACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACCGGAAGGAAACCTGTTGATCATACACTACCACGTGGACAACAGAGTCTGGTTACTTGGGCTACACCTAAACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCAAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCTAACATGAGCATTGTAGTCAAAGCTCTTCAACCTCTGTTGACTGCTCGAGCTGGACCTGCTGGTGAAACAGCAAATTAA 1086 0.4411 MSCFSCCEEDEYHKAAESGGPYVVKNPAGNDGNYHASETAKQGAQAVKVQPIEVPEIQADELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGPAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARAGPAGETAN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00685 361 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Car04g00685 361 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Car04g00685 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Car04g00685 361 CDD STKc_IRAK 75 348 - -
Car04g00685 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Car04g00685 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Car04g00685 361 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Car04g00685 361 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Car04g00685 361 Gene3D Transferase(Phosphotransferase) domain 1 144 354 - -
Car04g00685 361 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00685 361 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00685 361 PIRSF ILK 12 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00685 Car-Chr4 6733021 6737208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00685 60 346 Receptor kinase-like Gene Family AT4G02010 51.546 5.73e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car04g00685 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00685 K13436 - gmx:100808383 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00685 04 6733021 6737208 Car04g00685 04 6733021 6737208 ECH
Car03g02845 03 73841737 73845816 Car04g00685 04 6733021 6737208 PCT