Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00683 ATGGAAAGAAAAGTTATAGTTTCAGCTGTTTCTGTGATTCTTGTAGTAGGTGTTGCCTTAGGTGTTGTTGCTCTTGTTCGAACATCAGGCCCAAGCGGTGAAACCGTTGTTCCCAGTGATGGAACCAATAACAACAACGATTTGAGTGCACATAATAAAGCTGTAACAGCAGTGTGCCAAAACAGCGATGACCATAAATTTTGTGTTGACACTCTTAGTGCTGTTAACACCTCAGACCCAAAAGATTACATAAAAAGTGTTGTCAAAAATACAATGGATAATGTGATCAAAGCATTTAACATGAGCGACAGACTCACAGTTGAAAATAGCAAAAACATTTCCAGCACAAAAATGGCCCTTGACGATTGCAAAGACTTGTTAGAATTCGCAATAGATGAATTACAAGCCTCCAATATTATGGTTAATGATAACGACATTCACAACGTTAATGACCGTGCATCAGAACTTAAAAACTGGTTAGGTGCTGTCATTGCCTACCAACAATCATGCCTTGACGGCTTTGACACCGACGGCGAAAAGAAGATTCAAGAACAGTTGCAAACAGACAGTTTGGATTATGTTGGAAAACTTACCGCGTTAGCACTTGATGTTGTGTCTGAGATTTCCAAAGTACTCATTGCATTTAACTTGGATTTGAAGGTTAATCCTGCTTCTCGTCGTCTTCTTGAGGTTGATCACGATGGTTACCCAACTTGGATGACTGCTGCTGATCGCAGGCTATTGGCTGATATGGATACAGGTCGTACTCCTAAACCTAATGTTGTTGTTGCCAAAGATGGAAGTGGCCAATTTAACACTGTTCTTGATGCCATTAACTCTTATCCTAAAGATCATGAAGGTAGATATGTTATCTACGTTAAGGCTGGTACCTACGATGAATACATTACCGTTGACAAGAAAAAGAAGAGAATTCTAATGTTTGGTGATGGCCCTACCAAGACTATCATCACTGGTAGTAAAAATTATGTAGATGGTTGGAAGACTATGAGAACTGCTACATTTTCTACTGTTGCAGAAGATTTTGTTGCAAAGTCAATGGCATTTGAGAACACAGCAGGAGCAAGCAAGCATCAAGCAGTAGCACTTCGCGTTCAAGGTGACAGATCAGTATTCTTCGACTGCGCCATAAGAGGTTATCAAGACACATTGTATGCACACGCCCACCGTCAATTCTATAGAAACTGTGAAATTTCAGGCACGATTGATTTCATTTTCGGGTACTCAACAACCTTAATACAAAGCTCCAAAATACTAGTGAGAAAACCAGGTCCAAATCAACAAACCATAGTGGTGGCTGATGGAACAGATCAAAAGAACATGCCAACAGGTGTAGTAATTCAGAATTGTGAGATCATGCCAGATGCATCATTGGAAGCTGATAGATTGACAGTGAGGTCTTATTTAGCGAGGCCATGGAAGGCTTATTCGAGAGCTATATTCATGGAAAATACAATTGGTGATTTAATTCAACCAGATGGATATCTTCCTTGGTCAGGAACACAATTCCTTGATACATGTTTCTTTGCTGAGTATGCTAACACTGGACTTGGTGCTAATTCTTCAGCAAGAGTTAAGTGGGGACATGGAGTTCTTACCAAAGAGGAAGCAATTAAATATACTGCTGATCAATGGCTCCAAGGTGGTGTATGGTTGCCAGCCACTGGCGTCCCCTTTGAACTTGGCTTCACTAAATGA 1716 0.4044 MERKVIVSAVSVILVVGVALGVVALVRTSGPSGETVVPSDGTNNNNDLSAHNKAVTAVCQNSDDHKFCVDTLSAVNTSDPKDYIKSVVKNTMDNVIKAFNMSDRLTVENSKNISSTKMALDDCKDLLEFAIDELQASNIMVNDNDIHNVNDRASELKNWLGAVIAYQQSCLDGFDTDGEKKIQEQLQTDSLDYVGKLTALALDVVSEISKVLIAFNLDLKVNPASRRLLEVDHDGYPTWMTAADRRLLADMDTGRTPKPNVVVAKDGSGQFNTVLDAINSYPKDHEGRYVIYVKAGTYDEYITVDKKKKRILMFGDGPTKTIITGSKNYVDGWKTMRTATFSTVAEDFVAKSMAFENTAGASKHQAVALRVQGDRSVFFDCAIRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYSTTLIQSSKILVRKPGPNQQTIVVADGTDQKNMPTGVVIQNCEIMPDASLEADRLTVRSYLARPWKAYSRAIFMENTIGDLIQPDGYLPWSGTQFLDTCFFAEYANTGLGANSSARVKWGHGVLTKEEAIKYTADQWLQGGVWLPATGVPFELGFTK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00683 571 Gene3D - 255 569 IPR012334 -
Car04g00683 571 PANTHER PECTINESTERASE 5 569 - -
Car04g00683 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 185 IPR006501 GO:0004857
Car04g00683 571 SUPERFAMILY Pectin lyase-like 256 567 IPR011050 -
Car04g00683 571 Pfam Plant invertase/pectin methylesterase inhibitor 54 202 IPR006501 GO:0004857
Car04g00683 571 SMART PMEI_2 50 204 IPR006501 GO:0004857
Car04g00683 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 208 IPR035513 -
Car04g00683 571 Pfam Pectinesterase 260 554 IPR000070 GO:0030599|GO:0042545
Car04g00683 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 210 IPR035513 -
Car04g00683 571 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Car04g00683 571 CDD PMEI-like_3 57 210 - -
Car04g00683 571 PANTHER PECTINESTERASE 5 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00683 Car-Chr4 6721821 6723976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00683 2 569 Carbohydrate Esterase AT3G05610 39.755 7.24e-142 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00683 K01051 - gmx:100820142 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02849 03 73868970 73871078 Car04g00683 04 6721821 6723976 PCT