Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00672 atgggaTATCTGATTGGGGTTGCCATGGTGAGTGTGATCACTATTATGATTGTATCAAAGATTTGGAGAATATTTGTAATTCTGTTTTGGAGGCCATATGCACTGACTAGGCACTTCAGAAAGCAAGGAGTGTTGGGGCCACCTTACTCACTTGTTTATGGTTCTCTCAATGATATCAAAACAATGATGAATGATGAAAGGAAAAACATCATGGATACACACTCACACGATATCACTCAAAGGGTTCTTCCTCACTATCAAATATGGTCCTCCTTATATGgggagagatttctatattggtatGGAACAGAACCAAGGATTTGCATATCTGATCCAGAGCTGGCCAAGGAAATTTTATCAAATAAATTTGGTTTCTATTCAAAACCAAAACAAAGGCCTTCTATAGTAACAATGATAGGACAAGGGATAGTTCTAATGGAAGGATTGGAGTGGGTTAAGCGCAGAAGGATACTCAATCCTGCCTTCTCCATGGATAGACTCAAGgttatgataagtagaatggcagaatgtaccatttccatgGTAGATGAGTGGAAAAAGCTAGCCATTGAAGAGAAGAACAAATCAAAGACAATAGAAATGTGTGAAGAATTTCGAAAGCTAACAGCAGATATAATCGCCCATACTGCCTTTGGTAGCAGCTTTGCTCATGGAAGGGAAACTTTTAATGCACAAACTCTTCTTCAAAAGCATTGTGTAGCTTCTAGTTCTGACGTTTTCATTCCTGGCTCCCAATATTTTCCTAGTCAAACAAATATTGAGATATGGAAGCTTGATAGGAAAATGAAGAAATCACTAGAATGCATTATAGAAAGCAGGTTGCAGCAATATTCTGAATCAGATAAGTCTTATGGAGATGATCTACTAGGAGTAATGATGGATGCAGAAAAAACGGATGGTGTTCTAAAGTTGAAGATGAATGAAATAATGGAAGAGTGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCCAACTTACTTATTTGGACTGTCTTTTTGTTGAGTTTGCACAGTGATTGGCAACACAAACTCAGGCAAGAAATCCTTCAGATTTGTGGCATGCAAATTCCTGATGCAGATATGCTTTCAAAGTTAAAAATGGTGAATATGGTATTGCTGGAAGCATTAAGGTTGTACTGTCCAGCAATAGAAATAATAAGAGTGGCTTCACAAGACATGAAATTAGGAGATTTGATGATCCCAAGAGGAACATGTCTCACAATCCCAGTTATAATGATTCAAAGGAATGAAAAATACTGGGGTGAAGATGCAAATGAGTTCAATCCAATTAGATTCATAAATGGAGTCTCTAAGGCTGCAAAGCACCCAAATGCTCTACTTGCATTTTCAGTGGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGTTGGAAGCTAAGACAGTGATGGCTTTGATTATTCAAAGGTTTTCTTGGTCTCTTTCCCCTGATTATCAACATGCACCTGCAAACAACCTCACTTTGCAGCCACAACATGGCCTTCCTATCATTCTAAAACCATTGCACTTGTAA 1557 0.3654 MGYLIGVAMVSVITIMIVSKIWRIFVILFWRPYALTRHFRKQGVLGPPYSLVYGSLNDIKTMMNDERKNIMDTHSHDITQRVLPHYQIWSSLYGERFLYWYGTEPRICISDPELAKEILSNKFGFYSKPKQRPSIVTMIGQGIVLMEGLEWVKRRRILNPAFSMDRLKVMISRMAECTISMVDEWKKLAIEEKNKSKTIEMCEEFRKLTADIIAHTAFGSSFAHGRETFNAQTLLQKHCVASSSDVFIPGSQYFPSQTNIEIWKLDRKMKKSLECIIESRLQQYSESDKSYGDDLLGVMMDAEKTDGVLKLKMNEIMEECKTFFFAGHETTSNLLIWTVFLLSLHSDWQHKLRQEILQICGMQIPDADMLSKLKMVNMVLLEALRLYCPAIEIIRVASQDMKLGDLMIPRGTCLTIPVIMIQRNEKYWGEDANEFNPIRFINGVSKAAKHPNALLAFSVGPRNCIGQNFAMLEAKTVMALIIQRFSWSLSPDYQHAPANNLTLQPQHGLPIILKPLHL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00672 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Car04g00672 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 512 - -
Car04g00672 518 Gene3D Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PANTHER P450, PUTATIVE-RELATED 10 512 - -
Car04g00672 518 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 Pfam Cytochrome P450 91 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g00672 518 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00672 Car-Chr4 6631611 6635905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00672 22 517 Cytochrome P450 AT2G46960 55.179 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00672 K20660 - aprc:113872106 818.15