Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00667 ATGACATCTTCATTCTCAACACAGTTGGTGCAGAGTCAGAACCTACTTTCTGGTTTTCATGCTATCCAGGGGAAGCCACAGGTAATCTGTAGCAGTGCCAGATCACAGCTTGGATGCAGTAAATTGTCTTCAAGATATCATTACTCGGCGAGGTTTTCTGTATCACAACAATCTAAAGCGAAATCAATCACTTCTCGGCGAATAACATGCACTAGTAGTGCTAAGGAAAATGTTGTAGAGCTGCAAGCCAAAGTGACAAACAAATGTTTCTTTGATGTAGAAATTGGGGATGAACCTGTTGGGAGGATTGTTTTTGGCCTATTTGGAGAGGTTGTTCCAAAAACAGTTGAGAATTTCCGAGCTTTGTGCACAGGAGAGAAAGGATATGGTTACAAGGGAAGCTACTTCCACCGTATAATTAAAGATTTCATGATTCAAGGAGGAGACTTCACTGAAGGAAACGGAACTGGTGGAGTCAGTATCTATGGTGCTAAATTTGAAGATGAGAATTTTGCTTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCGTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTAGAGACTTCATGGTTAGACAAGGCTCATGTTGTGTTTGGACATGTCATTGATGGACTGGATGTTGTGAGGACACTTGAATCACAGGAGACAAACAGATCCAACAATAATCCCCGGAAAGCATGCAAAATTGCTAACTCTGGAGAACTGCCTATAGATGAATGA 762 0.4134 MTSSFSTQLVQSQNLLSGFHAIQGKPQVICSSARSQLGCSKLSSRYHYSARFSVSQQSKAKSITSRRITCTSSAKENVVELQAKVTNKCFFDVEIGDEPVGRIVFGLFGEVVPKTVENFRALCTGEKGYGYKGSYFHRIIKDFMIQGGDFTEGNGTGGVSIYGAKFEDENFALKHVGPGVLSMANAGRNTNGSQFFICTVETSWLDKAHVVFGHVIDGLDVVRTLESQETNRSNNNPRKACKIANSGELPIDE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00667 253 SUPERFAMILY Cyclophilin-like 81 249 IPR029000 -
Car04g00667 253 MobiDBLite consensus disorder prediction 228 253 - -
Car04g00667 253 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 37 252 - -
Car04g00667 253 CDD cyclophilin_ABH_like 88 247 - -
Car04g00667 253 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 90 248 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 91 246 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 194 206 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 207 222 IPR002130 GO:0000413|GO:0003755
Car04g00667 253 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 37 252 - -
Car04g00667 253 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 131 148 IPR020892 GO:0003755|GO:0006457
Car04g00667 253 Gene3D - 73 253 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00667 Car-Chr4 6579952 6582333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00667 34 243 U-box Gene Family AT5G67530 36.019 2.44e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00667 K03768 - gmx:100526955 380.563