Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00665 ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTGGTTCCATTCAATGCCAAAAATGGTGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTAGGCCATTCCTTTTGTTATGTTAGGCCAAACATTTTTGAATCTCCTGCTATTAGTCCATCAAACTCTGAGAGGTTTACTGTTGATTCAAGTACACTTGATTCTGAAACCTTGAGTGGATCCTTTAGGCATGATAGTATGGAGGATTCTAATGGTATGCATAATAAGCAGGTTAAGAATTTCCCCGAAACTACGTTTAAAACGATTTCGGGGGCTTCTGTTAGCGCTAATGTATCCACTGCAAGAACTGGTGGTAACCAGAGTGCATTTTTTGCTGGTGATGTTTTGGAACCTGCTGCATCATTTGAAGGAACTGCTTCATTTGCTGCGATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTTTGAATGGCTTTATGTCTGGTCCTTTGGAGAGAGGGTTTGCGTCGGGTCCGTTGGATAGAGGTGGTGGTTTCATGTCGGGGCCGATTGAGAAGGGAGTTATGTCTGGTCCTCTTGATGACACTGATAAATCCAACTTTTCGGCTCCGCTTGCGCGTGGTCGTCGGAGGCCGCGTCTCCAAAATCTCATGAGAAGTGTTAGTGGACCGATGAAGAACACATTTTCTCGAACGTTCTCTAAGCGTTCCATGGGTGCAAGTTGGATGCAAAGGTTAATATTTCAACCGGTTAGTCAATTCGCGTGGAATTCCCGAGATACAAAGTGTAGGCCGGAAGTATCTAGGAACTGTATTGATGTTGGACCGTTTGAAACTGAGTATAAACACACACATAATTTGCAGTGGGCTCAGGGAAAGGCCGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATCGGGATATACGACGGATTTAGTGGACCAGATGCTCCTGATTTTTTGATGAGCAATCTTTATAGATTTATGGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTTGATCCACTTAAACCTGAAGTCCCTGAAACTGTAAAATCTACTGTTGCTCCAGATTGTAGTATACCGGAAATGGATACTCATCGTACTAATTCTAATCATGAATGTGTTGAAGAAGCTTCTTGTCCTGAATCAATCAAGGATGAATCATTTAAGAGTGAGATAGTTGAGGAAAATGCTGAAGTTAATGGAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAACTCGTTGCCTGTTCCTAATTCTGCTCAACTTGAAAAGTTAACCGGAAAAGGTAGAAAAAGTTTGAGGCTTTATGAGTTACTTCAAATGGAATCTTGGGATGATCAAGGTTTTTTGTCAGACTCGGGACAATGTAAAGATTCTTCAGTTTTGAAGGAGTCAAAACTAGATTCACATATGAGACCTTGCTTGTCTAATGTAAGAGAAAATGGCTCTAGACATCAGGATGAAGGCCCCTCTACATCAGGAGAAAATGGAGGCAGTAGGTTTGGTTCAACCGACCAGGAGCACGAAGCTGTTTTTTCTGTTTCGGGATCTAGGCGGAATTCAAAAAAATCATTTATCAGTGCAAAAATTAAAAGAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAAGTTGTGTTGATGAGAAAATATTTGAAGCCTCGGGGCCTATTAGAAAATGCAGGTCTGGAGTAGATCATAATGCAGTTTTAAGTGCAATGGCTCGAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAATGGCGGAGCGTAATCTGGACAAAAATCCAGAACTTGCTATTATGGGATCATGTGTTCTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGTCATCCTAATTCATGTTCTGTCAAGGATGACGCAAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTTGATAGGATTTCAGAGGAGTCACCAATTCACAACCATAACAATCATGTTAACAAGATGAACAAAAACCGCGAGATATCCTTTTGCAAATTAAAAATGAGGGCTCTGCAACTTTCTACGGATCACAGCACTGGTATCGAAGAGGAAGTTTTCAGAGTAAGAGCAGAACACCCTGATGATAGTCAAGCCATATTAAACGATCGAGTGAAAGGACATTTAAAAGTTACGAGAGCATTCGGTGCCGGGTTCTTGAAGAGGCCGTCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTAATTATGTTGGCTCTGCTCCTTACCTAAGTTGTACTCCTTCCGTTCTTCACCACCGACTTTCCTCAAGTGATCGATTCTTGGTGCTTTCCTCTGATGGGCTTTACCAATATTTCAATAATGAAGAGGTAGTTGCTCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGTGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCTGTGCTGCTAAAAAGAATGGAATGAACTTTCATGAATTGCTTGATATTCCTCATGGAGACCGACGTAAATATCATGATGATGTTTCTGTCATGGTGGTTTCTTTGGAGGGAAGGATTTGGAAATCATCAGGATAA 2694 0.4143 MGNGTSRVVGCLVPFNAKNGVDLEFLEPLDEGLGHSFCYVRPNIFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEDSNGMHNKQVKNFPETTFKTISGASVSANVSTARTGGNQSAFFAGDVLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQNLMRSVSGPMKNTFSRTFSKRSMGASWMQRLIFQPVSQFAWNSRDTKCRPEVSRNCIDVGPFETEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFMDKELEGLLWDYEDNPVDPLKPEVPETVKSTVAPDCSIPEMDTHRTNSNHECVEEASCPESIKDESFKSEIVEENAEVNGNVEHQLSNCGSNSLPVPNSAQLEKLTGKGRKSLRLYELLQMESWDDQGFLSDSGQCKDSSVLKESKLDSHMRPCLSNVRENGSRHQDEGPSTSGENGGSRFGSTDQEHEAVFSVSGSRRNSKKSFISAKIKRMYRKPKSLCKKLFPWSYDWHREESCVDEKIFEASGPIRKCRSGVDHNAVLSAMARALERTEEAYMEMAERNLDKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSCSVKDDARHRNRSRESLVRMELDRISEESPIHNHNNHVNKMNKNREISFCKLKMRALQLSTDHSTGIEEEVFRVRAEHPDDSQAILNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVNYVGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFNNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMNFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWKSSG 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00665 897 MobiDBLite consensus disorder prediction 51 71 - -
Car04g00665 897 PANTHER PROTEIN PHOSPHATASE 2C 11 897 IPR015655 GO:0004722|GO:0006470
Car04g00665 897 Gene3D - 266 425 IPR036457 -
Car04g00665 897 Gene3D - 511 894 IPR036457 -
Car04g00665 897 SUPERFAMILY PP2C-like 291 889 IPR036457 -
Car04g00665 897 MobiDBLite consensus disorder prediction 655 677 - -
Car04g00665 897 PANTHER PROTEIN PHOSPHATASE 2C 32 11 897 - -
Car04g00665 897 MobiDBLite consensus disorder prediction 485 529 - -
Car04g00665 897 Coils Coil 595 615 - -
Car04g00665 897 CDD PP2Cc 594 888 IPR001932 -
Car04g00665 897 ProSiteProfiles PPM-type phosphatase domain profile. 279 888 IPR001932 -
Car04g00665 897 SMART PP2C_4 279 886 IPR001932 -
Car04g00665 897 MobiDBLite consensus disorder prediction 500 529 - -
Car04g00665 897 Pfam Protein phosphatase 2C 607 673 IPR001932 -
Car04g00665 897 Pfam Protein phosphatase 2C 720 837 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00665 Car-Chr4 6561425 6568096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00665 1 897 PP2C-type Phosphatase Gene Family AT2G46920 63.187 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00665 - - cam:101510249 1799.64