Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00648 ATGGTGAAACTTTTCTGGGTTAGCATTGTATTAGGAATTGTTTTCACCAACTTGATTGATATTGATGCCTATCACATCAATGAAACTGAGTTGTCTCTATTAGAGGCTCATGAAGCTTCATTTTCCTTAGTTGCTACTAATCCTCACATGGTTGGAATTACCATTATTCATTCTGCTGCTGCTAAAGGGGCTGTATGCTTGGATGGAACATTGCCTGCTTATCATTTCGATCGAGGACACGGATCAGGCGCAAACAACTGGCTCGTTAATTTAGAGGGAGGTGGATGGTGTAATAACATTAGAACATGCGTATATCGCAAGACATCAAGGCATGGATCATCAAAATTAATGGAAAAAGCGATAGCTTTTACAGGAATATTAAGCAATAATTTTCATGAAAATCCAGATTTTTTTAACTGGAACCGAGTGAAAATTCGTTACTGTGATGGCGCCTCTTTTACTGGGGATAGTAAACATAAGGCTGCGCAACTGCAATTCAGAGGACAACGCATATGGTTGGCTGCAATGGAGGAGTTGATGTCAAAGGGAATGCGATATGCCAATCAGGCTCTTCTTTCTGGATGTTCAGCGGGTGGTCTGGCTACTATTTTACACTGCGATGATTTTCGAGATCTATTCCCGAGGACTACTAAAGTGAAGTGTCTTAGTGATGGTGGATTATTTCTTGACGCTTTTGATATAGCTGGTGGGCGTACCCTCAGGAAATTTTTCAATGGTGTTACAACATTACAGAGAGTAAAGAAGGATCTTCCACAGACATGTACTAATCATCTTGATCCCACTTCGTGCTTCTTTCCTGAGAACTTAATTGCCAGTATAAAAACACCACTATTCCTTCTTAATTCTGCATATGACTATTGCAGATCCAGGCAAGCTTAG 900 0.4033 MVKLFWVSIVLGIVFTNLIDIDAYHINETELSLLEAHEASFSLVATNPHMVGITIIHSAAAKGAVCLDGTLPAYHFDRGHGSGANNWLVNLEGGGWCNNIRTCVYRKTSRHGSSKLMEKAIAFTGILSNNFHENPDFFNWNRVKIRYCDGASFTGDSKHKAAQLQFRGQRIWLAAMEELMSKGMRYANQALLSGCSAGGLATILHCDDFRDLFPRTTKVKCLSDGGLFLDAFDIAGGRTLRKFFNGVTTLQRVKKDLPQTCTNHLDPTSCFFPENLIASIKTPLFLLNSAYDYCRSRQA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00648 299 PANTHER PECTIN ACETYLESTERASE 2 49 292 - -
Car04g00648 299 PANTHER NOTUM-RELATED 49 292 IPR004963 GO:0016787
Car04g00648 299 Pfam Pectinacetylesterase 46 293 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00648 Car-Chr4 6407962 6411758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00648 1 292 Carbohydrate Esterase AT3G05910 64.966 9.00e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00648 K19882 - gmx:100788448 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00648 04 6407962 6411758 Car03g02879 03 74112121 74115380 ECH
Car04g00648 04 6407962 6411758 Car04g00648 04 6407962 6411758 ECH
Car03g02879 03 74112121 74115380 Car04g00648 04 6407962 6411758 PCT