Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00627 ATGGGTGGTGATCTAGAAGCTGAATTGTCAAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAATTATTGGAATTGGAGTTGGATTGTCTATTATTGTAATTCTATCTGTGCTTTCATATTGCCTCACTTCAAGGAAGAAGTCTAGAAAAAGTAGGGATGAGGTTCCTGTTAGTCAAATACCTGTTGTGTCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCATCAAATGGATTCCTTCCTCGCGACGGAATACTTCTTACAATTCATGATAAATCGAGCGACAAAGAATCAGACAAAGTTATGGTTCATTTAGGTAAGATGAAGCATGAGGATAGTGGAAGTCATTCTGATTCATTTCATCATTTGGACCGGTCACAATCGGGGGATGAAGGTAGCTCTGGTTCAGTTAAACTGTACAGGCCCTCCTCCTCTTCATACCCTTTAACAGCTCCTTCACCATTGTGTGGCCTTCCAGAATTTTCTCATTTAGGTTGGGGTCATTGGTTTACATTGAGGGATCTTGAACTTGCTACAAATCGTTTTTCGAAAGAAAATATCCTTGGTGAGGGTGGATATGGAATTGTTTACAAGGGACAGTTAATCAATGGTTCTGCAGTGGCCGTTAAAAAGTTACTCAACAACATTGGTCAAGCAGAAAAAGAATTCAGAGTGGAAGTTGAAGCCATCGGTCATGTCCGGCATAAAAATTTGGTCCGTCTTTTGGGGTACTGCGTTGAGGGGACTGACAGGATGTTAGTGTATGAATATGTCAATAATGGAAACCTTGAGCAATGGCTTCATGGAGCTATGCGGCATCATGGGTATCTGACCTGGGAAGCACGAATTAAGATTCTCCTTGGCACGGCTAAGGCGCTTGCATATTTGCATGAAGCGATTGAGCCGAAGGTGGTTCACCGAgatatcaagtcaagcaatatattaattgatgatgatttcaatgccaaggtttctgattttggcctggccaaGTTACTAGGTCCTGGGATGAGCTATGTTACAACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATAGCGGTCTGCTAAATGAAAAGAGTGATGTTTATAGCTTTGGTATTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTAGACCATGGCCGTCCGGCACAGGAAGTTAATCTGGTCGATTGGCTGAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTAGTGGACCCCAACATTGAGGTGAAGCCATCAACTAGAGCTTTAAAACGGACTCTCTTAACTGCTTTAAGGTGTGTGGATCCAGATTCAGAGAAAAGGCCCAAGATGGGCCAAGTCGCTCGAATGCTTGAGTCGGAGGAGTACCCTTTACCACGAGAGGACCGAAGGCTGCGAAGAAATCGTGGGGGTAGCACAGAAATTGAATCCCAGAAGGAGAGTTCTGACACAGATGGGAGTGATATCCAAGGTTCTCAATCAGAAAGCCGAAGTTAA 1509 0.4142 MGGDLEAELSKKTPIFGIKVWEIIGIGVGLSIIVILSVLSYCLTSRKKSRKSRDEVPVSQIPVVSKEIKEVRVEQVSSNGFLPRDGILLTIHDKSSDKESDKVMVHLGKMKHEDSGSHSDSFHHLDRSQSGDEGSSGSVKLYRPSSSSYPLTAPSPLCGLPEFSHLGWGHWFTLRDLELATNRFSKENILGEGGYGIVYKGQLINGSAVAVKKLLNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTDRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGPGMSYVTTRVMGTFGYVAPEYANSGLLNEKSDVYSFGIVLLEAITGRDPVDHGRPAQEVNLVDWLKMMVGSRRSEEVVDPNIEVKPSTRALKRTLLTALRCVDPDSEKRPKMGQVARMLESEEYPLPREDRRLRRNRGGSTEIESQKESSDTDGSDIQGSQSESRS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00627 502 SUPERFAMILY Protein kinase-like (PK-like) 168 463 IPR011009 -
Car04g00627 502 PANTHER OS01G0323000 PROTEIN 3 501 - -
Car04g00627 502 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Car04g00627 502 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 501 - -
Car04g00627 502 ProSiteProfiles Protein kinase domain profile. 184 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00627 502 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00627 502 Gene3D Phosphorylase Kinase; domain 1 167 259 - -
Car04g00627 502 MobiDBLite consensus disorder prediction 112 145 - -
Car04g00627 502 Gene3D Transferase(Phosphotransferase) domain 1 260 467 - -
Car04g00627 502 MobiDBLite consensus disorder prediction 441 502 - -
Car04g00627 502 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00627 502 CDD STKc_IRAK 190 456 - -
Car04g00627 502 MobiDBLite consensus disorder prediction 441 487 - -
Car04g00627 502 MobiDBLite consensus disorder prediction 488 502 - -
Car04g00627 502 MobiDBLite consensus disorder prediction 112 130 - -
Car04g00627 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Car04g00627 502 MobiDBLite consensus disorder prediction 131 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00627 Car-Chr4 6201542 6205606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00627 161 458 Trihelix Transcription Factor Family AT1G70460 50.825 2.12e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car04g00627 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00627 - - gmx:100787014 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00627 04 6201542 6205606 Car03g02893 03 74221595 74232787 PCT