Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00621 atgggttttagtaatgggaattcagattcgaaattagaaaCGGTTGAGATAAAGGAGCTGAGATTCACTTATCCTGGCATCGACGGCCATCCTCCGCCGGGTTCCAAACCTCTCATTCAAGACTTCTCTCTCACACTCTCTTCCGGTGATCGTTGCCTTCTCGTCGGATCCAATGGCGCCGGAAAGACCACAATCCTGAAGATATTAGGAGGTAAGCACATGGTGGAGCCTGAAATGGTTCGTGTGCTTGGAAGATCGGCTTTTCATGATACCACTTTAACATCTTCTGGTGATCTCTGTTATCTTGGTGGTGAGTGGAGGAGAGATGTTGCATTTGCAGGTTTTGAAGTTCCAATAcagatggacatttctgctgagaaaatgatatttggtgtggccggtattgaacctgaaagaagagcagagcttatcaaGGTATTAGATATCAATCTTTCATGGAGATTGCATAAAGTATCTGATGGTCAGAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTGGATGAGATAACAGTCGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAACTTTCTAAGAAAGGAATGTGACGAGAGGGGTGCCACTATTATATATGCAACACATATATTTGACGGTCTTGAGAATTGGCCAACAAACATTGTTTATGTAGCTCATGGAAGGTTGCAATTATCATTACCCATAGAGAAAGTCAGAGAAACTAGCAAACTGTCACTAATGGTTGGTTTTGTTCCTAATTTTGATCTCAAGAAGCTCTCTCTCAACCAATCATTCAATTATTTCTGTGTCACTCACTGTATTGTATAG 849 0.3651 MGFSNGNSDSKLETVEIKELRFTYPGIDGHPPPGSKPLIQDFSLTLSSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIEPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLNFLRKECDERGATIIYATHIFDGLENWPTNIVYVAHGRLQLSLPIEKVRETSKLSLMVGFVPNFDLKKLSLNQSFNYFCVTHCIV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00621 282 Gene3D - 4 258 IPR027417 -
Car04g00621 282 SMART AAA_5 48 235 IPR003593 -
Car04g00621 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 254 IPR027417 -
Car04g00621 282 Pfam ABC transporter 40 185 IPR003439 GO:0005524
Car04g00621 282 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 13 255 - -
Car04g00621 282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Car04g00621 282 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 13 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00621 Car-Chr4 6167200 6170620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00621 15 223 Calmodulin-binding Proteins AT2G36910 25.221 1.42e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00621 K12608 - gmx:100782386 447.973