Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00618 ATGAACACAATTACTCTCATTCGCAACCGCGCTATCAAATCCGCGCGTAGAACTCTCATTGGTTTAAACAATTCGTCGTTGTTTGGGTCCCCACCACTTCGTCACCATGCTCTTATCTTGGCTAACGATTTGTCACAACCACGTTTCAATCACTACCCTTTTCGAATATTTAGGTTTCAGCGCGAATTGAATGGTTCCCACAAACTTTTTAACTCACCCTCTTCGAATTCTATCACTTCAAGGTCTTTTCGTTTAAGCTCAGAAAATAGGGTTGTTTCAACCATTGCAAGAGTTGGATTCAAGCTTCAAAGTTTCTCAACTTCAATCGAGACACGTGTCAATGACAATAATTTCGAGAGGATTATCATTCAAGGTGGCATGAATGTGAAGCCATTAGTGGTGGAAAGTGTTCATGAGAATGTTGTAAGAGAAGAAGAGTCTCAATCGAATGTTGAAAAACAAGCTTGGAAGTTATTGAAGGATGCTGTTGTGACTTATTGTGGTAACCCTGTGGGGACAGTGGCTGCAAATGATCCTGGTGATAAGCTACCATTGAATTATGATCAGGTGTTTATTAGGGATTTTATTCCTTCAGCTCTTGCTTTCTTGCTTAAAGGAGATAatgagattgtcaagaattttcttcttcacactttgcagttgcagAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACCGTAGCTCTTGACGGAGATACCCGTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGAGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTACGGGCTTATGGGAAGCTTACCGGTGACTACAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGCTTGAAAATGATACTTAAATTGTGTCTAACAGATGGTTTTGATATGTTTCCGTCTCTGCTAGTCACCGATGGGTCTTGCATGATAGACAGGCGTATGGGCATTCATGGTCACCCTCTTGAAATCCAAGCATTATTTTACTCAGCTCTTCGCTGCTCACGGGAAGTGCTTGCTGTAACTGATGGAACTAATGATCTCGTTCGAGCCATTAACAATCGACTGAGTGCACTATCATTCCACATTAGACAATATTATTGGGTGGATATGAAAAAGATTAATGAAATATACAGGTACAAAACAGAAGAGTACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTCTGGGTAATGGATTGGATTCCTGAAAAAGGTGGGTATCTAATTGGGAATCTGCAACCAGCTCACATGGATTTCCGGTTTTTCACACTGGGAAATCTTTGGTCTATTGTTTCGTCTCTGAGCACCCCAAGACAAAACGAGGCTATTTTGAATCTGATAGAAGCAAAATGGGATGATCTTGTAGGGCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATTATTACTGGTAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCCTGGCCAACCCTTTTGTGGCagTTCACACTGGCATGCATCAAAATGGGGAGAATTGAACTAGCCCAGAAAGCAGTTGATTTGGCTGAGAAAAGACTACCAGTTGATTCTTGGCCCGAATATTACGATACTCGATCTGGAAAATTTATCGGAAAACAAGCCCGGCTGTATCAAACGTGGACCATAGCCGGGTTCCTTACATCTAAGATGCTTTTGAAGAATCCAAAAATGGCATCCATGTTATTCTGTGAGGAAGATTATGAGCTTCTTGACATATGTGTATGTGGACTTAGCAAGAGTGGAAGGAAAAAATGCTCACGCGTTGCTGCCAAGTCTCAAATTCTTCCCAATGCTTTCACTGTTTCTTCTGTTTTGAAGGCAGGCACCTTAGTTGAAATCAGCTCTGACGACGACGGATTCCGCGGTTCTTGGTTCACCGGCAAGATCATCCGTCGCGTCTCTTCCGACAAGTTCATGGTGGAGTACGATACTTTGATGGAGGATGAGGAAGGCACTAAGCGTCTGAGAGAACCCCTCAAGGTTCACCAGCTCCGGCCGATTCCACCGACGGAGACCAACCGGGAATTCAAATTCGGTGAAGAAGTTGATGCGTTTCACAACGACGGATGGTGGGAAGGTCATATCGCTGAAATAGTGTCGGATGGAAGGTTCGGTGTGTATTTTAGAGTCTCCAGGGAGCAGATCGTGTTCTCTAAGGAGGAACTCAGGCTTCACCGTGAATGGGTCAATGATAATTGGGTTCCACCCTACCAACAACAGGGTGATAGTGAAATCAAGAAAAATGTGCTGGTGAAGGCTATTGAAACTGTGACTGAAGAGAAGGAGGAATTTGAGTTGAAGCCAGGGACCCCGGTTGAGGTGTGTAGTGATGAAGATGGTTTTCGGGGAGCTTGGTTTCGTGCCACCCTTGTTGACAAAAAGGGAGCAGACAAGTTTGAGGTGGAATATGAGAGCCTGCTGGATGATGAATTGAATCTATTAAAAGAAGAGATAGATACACTGCACATCAGGCCATGTCCACCGAAAACCGCTGATGTTGCTCAGTTCAAACTTCTCGACGAAGTTGATGCTTTTTACAATGACGGTTGGTGGGTTGGTGTTGTTTCTAAAGTTCTTGGGGACTCCAAGTATATTGTTTATTTCAGGAACTCCAATGAAGAACTGGAGTTTCAGCATTCCCAGTTGAGGCTACATCAGGACTGGATGGATGGCAAATGGGTCATGGTTTCTAAGGCGTTGAAGATTTGA 2826 0.4292 MNTITLIRNRAIKSARRTLIGLNNSSLFGSPPLRHHALILANDLSQPRFNHYPFRIFRFQRELNGSHKLFNSPSSNSITSRSFRLSSENRVVSTIARVGFKLQSFSTSIETRVNDNNFERIIIQGGMNVKPLVVESVHENVVREEESQSNVEKQAWKLLKDAVVTYCGNPVGTVAANDPGDKLPLNYDQVFIRDFIPSALAFLLKGDNEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDGDTREEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREVLAVTDGTNDLVRAINNRLSALSFHIRQYYWVDMKKINEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLSTPRQNEAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVDLAEKRLPVDSWPEYYDTRSGKFIGKQARLYQTWTIAGFLTSKMLLKNPKMASMLFCEEDYELLDICVCGLSKSGRKKCSRVAAKSQILPNAFTVSSVLKAGTLVEISSDDDGFRGSWFTGKIIRRVSSDKFMVEYDTLMEDEEGTKRLREPLKVHQLRPIPPTETNREFKFGEEVDAFHNDGWWEGHIAEIVSDGRFGVYFRVSREQIVFSKEELRLHREWVNDNWVPPYQQQGDSEIKKNVLVKAIETVTEEKEEFELKPGTPVEVCSDEDGFRGAWFRATLVDKKGADKFEVEYESLLDDELNLLKEEIDTLHIRPCPPKTADVAQFKLLDEVDAFYNDGWWVGVVSKVLGDSKYIVYFRNSNEELEFQHSQLRLHQDWMDGKWVMVSKALKI 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00618 941 Pfam Agenet domain 808 867 IPR008395 -
Car04g00618 941 Pfam Agenet domain 647 708 IPR008395 -
Car04g00618 941 Gene3D - 186 585 IPR012341 GO:0005975
Car04g00618 941 Pfam Alkaline and neutral invertase 155 594 IPR024746 GO:0033926
Car04g00618 941 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 31 634 - -
Car04g00618 941 SUPERFAMILY Six-hairpin glycosidases 154 598 IPR008928 GO:0005975
Car04g00618 941 SMART agenet_At_2 713 769 IPR014002 -
Car04g00618 941 SMART agenet_At_2 873 929 IPR014002 -
Car04g00618 941 SMART agenet_At_2 642 711 IPR014002 -
Car04g00618 941 SMART agenet_At_2 803 870 IPR014002 -
Car04g00618 941 PANTHER - 31 634 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00618 Car-Chr4 6135747 6150992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00618 815 927 PHD Transcription Factor Family AT5G58610 31.852 6.76e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00618 - - gmx:100797025 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02905 03 74307771 74310840 Car04g00618 04 6135747 6150992 PCT