Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00616 ATGTCCAACGACAACAAAGACACTGGCCAATACGGCGTTCTTCTCTATTACAAGTACGTCGATATTCCCAACCTCAACGACCTCCTCACATTCTACCGCTCCAACTGCTCCTCTCTCAACCTCCTCGGTCGTGTTCGTCTTTCTTCCCACGGCGTCAATGTCACCGTTGGTGGTAGCTTATCCTCTTTGCAACGACACATCGAAGCCCTCAACGCGCTCAGTACCTTATTTCATGGCACTGATTTCAAACTTGCAGCTTGTCATCAACCATTAAACGACGACGTTGCTAAGGAGTGCGGCTTCACTTCTCTCTCTATTCGGATCGTCAAGGAACTGGTTACTCTCAGTTCTCACCCACTATTAAAGTCACCTGAAATCTCAAATGCTGGAAGACATCTATCTGCACTTGAGTTCCATTCTACTCTTCACAATGCTAATAAGGAGACTATGGAAAACGGgcttgttttacttgatgcaaggaatctgtatgaaacaagaattggaaaattttatgcaccaaatgtTGAAACCTTGGATCCGCAAGTTCGGCAGTACAGCGATTTTTCATCATGGATAGATGATAAGAGTGAGCAGTTGAAAGGCAAAAATATCCTGATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCGGCATATATTAAGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAGGTTCAGATGCTAGTACAATTGGTGCCTGCCTTATTTGTCGCTGTTCCTTTGACGATTACTCTTCACGCTGTAGATGTACTTATTGCAGAATGCTTGTCTTGGTTTGTCATAGTTGCCAGAATGAATCTGCACTGTACGTTTGTGAGCTATGCCAAAAACAGGGCAAGGCTGTTGGGTCAAAGCAGTTAATTGAAAATGATGATTCAGAAAAGTCACTGCAAGGTGTTGAGTTCCAGAATTTTTCTTCAGATACTATGCTGTTGGCTCAAGTGCCTAGGGGAGATGACGTAACAACCTCAAGAAAACTGAGAATCTTATGTTTGCATGGGTTTCGGCAGAATGCTTCCAGCTTTAAGGGAAGAACAGCATCGTTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCATGAAGTGCCCTTCATTTATCAAACACCCGTGCCAATGGCTCATGTGAATGGTGCATTATCCTCTTTGCCAGCTAGTCCTCCTCCGCCTTTGGAGAATTGCAAGAAGAAGTTTGCATGGTTCGTGGCACCCAATTTTGATGGAAGTAATGGTGTTGATTGGAAGGTAGCAGATGGTCCATTCGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGACATTTCACTATCGCATTTAGAGAATGCGTTCTCCAAAGAAGGGCCGTTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGACTGCCATAATCTCATCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTCAAATTTGTTGTCTTGTGCTCTGGCTTTGCTCTCAAATTGAAGGAGATGGAGTATAGCCCTATCAAGTGCCCTTCTCTTCATATATTTGGTAATGAACATGGTCAAGACAGACAGATAGCCAACCAAGCAAGCAAGGACCTTGCTTCTCTATATGACAGCGGTTGTTCTGTGATCATTGAACATGACTGCGGTCATATAATTCCTACCCGGTCACCATATATTGACGAGATTAAGGCTTTCCTTGGGCGGTTTCTTTTAAACCTCTATTCTTGCGAGTTTAACGCAAAAGATAGAAGAAGCATAAGGGAGATGCAGCGTGTTGTAAGAAAACTAACCAACACATATTCACAAAGACAGGTTCTAGGTTTTCGTTCCTATTGCAATGACAGGGTTGCTGTTGATGTTGGACAACCAACCCCTGCATCTCATCCACAGCTTCTAAAAGATGGGGAGATCACACCAGGCATATCTAGTGAGGAATACATCCTAAGAAGAAAAAAAATGTTGGAACTTCTCCCGGAGAAAAGTTTGGCTATCATTGCTGCTGCCCCAGTAAAGATGATGACAGATGTCGTGCCTTATACATTTCGACAAGATGCTGATTACTTGTATATTACAGGCTGCCAACAACCTGGTGGTGTGGCCATTTTAGGGCATGACTTTGGTTTATGCATGTTCATGCCAGAAGCCAAGCCTTATGATGTGACTTGGCAAGGGCATATAGCCGGAGTTGATGCAGCATTGGATACATTCAAGGCTGACAAGGCATATCCAATGAGAAAATTGCATGAGATCCTTCCAGATATGATAAGGGGGTCCTCAAAATTGTATCACAATGTTCAGACTGCTACACCATCATATACGGAACTGGAGGCCTTCAAGAAACTAGCTTACTGCAGCAATGTAAGGGATCTATCTGTTTATACCCATCAGCTGCGATGGATAAAGTCTCCTTCGGAGCTTTCGCTGATGAAGCAATCAGCATCAATTGCTTGTCAGGCTCTTTTGCTGACAATGATGCATTCAAAAACACACCCTTTTGAAGGTATGCTAGCTGCAAAGGTTGAATATGAATGCAAAGTGAGAGGTGCCCAGCGAATGGGATTCAATCCCGTGGTTGGTGGTGGGCCTAATGGAAGTGTTATACATTATTCTAGGAATGATCAGAAGATTAAAGATGGAGATCTTGTTTTGATGGATGTTGGATGTGAGTTACATGGCTATGCTAGTGATCTCACACGCACATGGCCACCGTGTGGTAGCTTCTCTTCTGCCCAGGAAGAACTGTATGAGCTTATAGTGGAAACAAACAAGCATTGTGTGGAACTCTGTAAGCCTGGTGCTAGTATTCGACAAATACACAACCATTCGGTTGAAATGCTGCAAAAAGGACTCAAGGAGGTTGGAATTTTGAGAGATGTTGGAAGCAGTTCCTACCATAAACTGAACCCAACTTCTATAGGTCACTATCTAGGAATGGACATTCATGATTGTTCAATGGTCAGCTTGGACGCTCCTCTGAAGCCAGGTGTTGTAATAACTATTGAACCGGGAGTGTACATCCCATCTTCTTTTAATTGTCCAGAAAGGTATAGAGGTATTGGGATAAGGATTGAGGATGAGATTCTTATTACAGAAACAGGTTATGAGGTCCTAACAGCATCAATTCCTAAAGAAGTGAAGCAAATTGAGTCCTTGCTAAACAACTTCAGCCATGGAATAGGGAACTGGGACAAGCATTGCATAGTCAATCAAAACTGTAGGGAGGGGGGACAAAATAACGAGAGAGAAGATCGACCAGGGTTTCCTTGCTTGTTTTGGGTTGTTCTCCTATTTTTTGTGGACTGA 3423 0.4216 MSNDNKDTGQYGVLLYYKYVDIPNLNDLLTFYRSNCSSLNLLGRVRLSSHGVNVTVGGSLSSLQRHIEALNALSTLFHGTDFKLAACHQPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTLHNANKETMENGLVLLDARNLYETRIGKFYAPNVETLDPQVRQYSDFSSWIDDKSEQLKGKNILMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGGSDASTIGACLICRCSFDDYSSRCRCTYCRMLVLVCHSCQNESALYVCELCQKQGKAVGSKQLIENDDSEKSLQGVEFQNFSSDTMLLAQVPRGDDVTTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKIAEFVFIDAPHEVPFIYQTPVPMAHVNGALSSLPASPPPPLENCKKKFAWFVAPNFDGSNGVDWKVADGPFDPLQYQQQTAGYDISLSHLENAFSKEGPFDGILGFSQGAAMTAIISSQQEKLKGKMDFKFVVLCSGFALKLKEMEYSPIKCPSLHIFGNEHGQDRQIANQASKDLASLYDSGCSVIIEHDCGHIIPTRSPYIDEIKAFLGRFLLNLYSCEFNAKDRRSIREMQRVVRKLTNTYSQRQVLGFRSYCNDRVAVDVGQPTPASHPQLLKDGEITPGISSEEYILRRKKMLELLPEKSLAIIAAAPVKMMTDVVPYTFRQDADYLYITGCQQPGGVAILGHDFGLCMFMPEAKPYDVTWQGHIAGVDAALDTFKADKAYPMRKLHEILPDMIRGSSKLYHNVQTATPSYTELEAFKKLAYCSNVRDLSVYTHQLRWIKSPSELSLMKQSASIACQALLLTMMHSKTHPFEGMLAAKVEYECKVRGAQRMGFNPVVGGGPNGSVIHYSRNDQKIKDGDLVLMDVGCELHGYASDLTRTWPPCGSFSSAQEELYELIVETNKHCVELCKPGASIRQIHNHSVEMLQKGLKEVGILRDVGSSSYHKLNPTSIGHYLGMDIHDCSMVSLDAPLKPGVVITIEPGVYIPSSFNCPERYRGIGIRIEDEILITETGYEVLTASIPKEVKQIESLLNNFSHGIGNWDKHCIVNQNCREGGQNNEREDRPGFPCLFWVVLLFFVD 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00616 1140 Gene3D - 122 275 IPR036873 -
Car04g00616 1140 Gene3D - 1 113 - -
Car04g00616 1140 SMART rhod_4 140 247 IPR001763 -
Car04g00616 1140 CDD Prolidase 846 1079 - -
Car04g00616 1140 Gene3D alpha/beta hydrolase 363 611 IPR029058 -
Car04g00616 1140 Pfam Serine hydrolase (FSH1) 366 601 IPR005645 -
Car04g00616 1140 ProSiteProfiles Rhodanese domain profile. 150 250 IPR001763 -
Car04g00616 1140 Pfam Metallopeptidase family M24 848 1071 IPR000994 -
Car04g00616 1140 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 2 609 - -
Car04g00616 1140 SUPERFAMILY Creatinase/aminopeptidase 842 1093 IPR036005 -
Car04g00616 1140 Gene3D - 680 838 IPR029149 -
Car04g00616 1140 Pfam UPF0176 acylphosphatase like domain 12 111 IPR040503 -
Car04g00616 1140 Gene3D Creatinase/methionine aminopeptidase superfamily 840 1100 IPR036005 -
Car04g00616 1140 SUPERFAMILY Creatinase/prolidase N-terminal domain 679 841 IPR029149 -
Car04g00616 1140 SMART AMP_N_2 681 812 IPR007865 GO:0030145|GO:0070006
Car04g00616 1140 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 264 IPR036873 -
Car04g00616 1140 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 2 609 IPR020936 -
Car04g00616 1140 Pfam Rhodanase C-terminal 252 317 IPR022111 -
Car04g00616 1140 SUPERFAMILY alpha/beta-Hydrolases 363 610 IPR029058 -
Car04g00616 1140 Pfam Aminopeptidase P, N-terminal domain 686 802 IPR007865 GO:0030145|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00616 Car-Chr4 6112026 6127000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00616 6 610 Sulfurtransferasese or Rhodanese AT1G09280 62.932 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00616 - - mtr:MTR_1g084180 1122.84