Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00609 ATGTTGGGTTCATCTTCCCAGAGTGGTAGATCAGTGGGTGTGGAGAATGGATCAAGAGGAGATACTATTTCTTTTGATCATGCGAAAAAATCTGCAGCACAGTATGATTTTTCAAGAAATAATGATCTGTTGAGTCGTGTGACTAGTAGTTTTGCTTCTGAAGATGTTCCCGACGCTGCTTCTGAGAAAGACCTGGGTAATGAGTTTTTCAAACAGAAGAAGTTTAAGGAAGCTATTGATTGCTATTCAAGGAGCATTGCCTTATCACCAACTGCTGTAGCCTATGCAAATAGGGCAATGGCCCGTATAAAGCTAAGGAGATTTCAAGAGGCTGAGGATGACTGTACAGAGGCATTAAATCTCGACGATCGTTACATAAAAGCATATTCACGGCGAGCAACAGCTAGAAAAGAACTTGGGAAAAATAAAGAATCTATGGAGGATGCCGAGTTTGCCTTGAGGTTGGAACCTAACAATCAAGAAGTCAAGAAACAGTATGCTGATGCTAAGTCGCTGTACGAGAAAGAAATTGTACATAAAACATCTAAAGCACTAAGAAATACTGTACAAAAATTGGGAAAGTCTGAGACAAAAGTTAATGGAAGCAGCAGCATTCAATCTGTTTCACATGATACTCAAAAGTCAGGGTCAGCTGAAGTTCATCATCGAACTAAGGGTAATGAGTGCCAAATTCCTGCTATAGAATCAGTCTTAATGGAGGAGATCGATAATAAGGATACAAAATCCGGAAGCAGGACTCAAGGACAAGCTGGCAATGGTTCTAAGGAAGGTTATAGTGCAAGTAACAGCTTGGAGCAGGTTAAGAGAAATCACAGAACTAGAAAACCAGAAATGAAAGCATCTGTTCAACAGCTTGCTTCTCAAGCTGCGTCTCGAGCCATGGCTGATGCTGCAAAAAACATAACGCCACCAACCACAGCTTATCAGTTTGAGGTCTCTTGGAGAGGGTTTGCAGGTGATTGTGCTTTGCAGGCTTGTCTATTGAAGGCAATGTCTCCCCATGAATTACCGAAAATATTCAAAAATGCCTTATCTTCTACCCTGCTAATTGAGATTATCAAGTGTGTTGCATCCTTTTTCGCTGAAGACGTGGATCTAGTTGTCAGTTATATGGATAATTTGACCAAGGTACCGAGGTTTGATGTGATCGTAATGTGCCTTCCATCAGCAGCTAAGGATGATTTGCGCAAGATCTGGAATGAAGTGTTCTGTAGCGAGGCAACTCCGATGGAATATGCCGAGATTCTGGGCAGCCTACGATCCAAATTCTACCTTGGATAG 1302 0.4171 MLGSSSQSGRSVGVENGSRGDTISFDHAKKSAAQYDFSRNNDLLSRVTSSFASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMARIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKNKESMEDAEFALRLEPNNQEVKKQYADAKSLYEKEIVHKTSKALRNTVQKLGKSETKVNGSSSIQSVSHDTQKSGSAEVHHRTKGNECQIPAIESVLMEEIDNKDTKSGSRTQGQAGNGSKEGYSASNSLEQVKRNHRTRKPEMKASVQQLASQAASRAMADAAKNITPPTTAYQFEVSWRGFAGDCALQACLLKAMSPHELPKIFKNALSSTLLIEIIKCVASFFAEDVDLVVSYMDNLTKVPRFDVIVMCLPSAAKDDLRKIWNEVFCSEATPMEYAEILGSLRSKFYLG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00609 433 PANTHER OS05G0129900 PROTEIN 26 432 - -
Car04g00609 433 MobiDBLite consensus disorder prediction 1 25 - -
Car04g00609 433 Pfam Potential Monad-binding region of RPAP3 310 399 IPR025986 -
Car04g00609 433 MobiDBLite consensus disorder prediction 192 229 - -
Car04g00609 433 MobiDBLite consensus disorder prediction 192 214 - -
Car04g00609 433 ProSiteProfiles TPR repeat profile. 59 92 IPR019734 GO:0005515
Car04g00609 433 SUPERFAMILY TPR-like 58 173 IPR011990 GO:0005515
Car04g00609 433 SMART tpr_5 59 92 IPR019734 GO:0005515
Car04g00609 433 SMART tpr_5 126 159 IPR019734 GO:0005515
Car04g00609 433 SMART tpr_5 93 125 IPR019734 GO:0005515
Car04g00609 433 MobiDBLite consensus disorder prediction 1 18 - -
Car04g00609 433 MobiDBLite consensus disorder prediction 245 287 - -
Car04g00609 433 ProSiteProfiles TPR repeat profile. 126 159 IPR019734 GO:0005515
Car04g00609 433 Pfam Tetratricopeptide repeat 63 91 IPR001440 GO:0005515
Car04g00609 433 Gene3D Tetratricopeptide repeat domain 47 157 IPR011990 GO:0005515
Car04g00609 433 MobiDBLite consensus disorder prediction 249 273 - -
Car04g00609 433 Pfam Tetratricopeptide repeat 94 122 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00609 63 129 U-box Gene Family AT3G07370 41.176 2.04e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00609 K23002 - gmx:100784528 606.675