Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00591 ATGTCGTATCGTCCAAGCGCCAACTCTAGGACCGATGTCCGTCGCAATCGATACAAGGTGGCTGTCGATGCCGAAGAAGGTCGCCGCCGGCGAGAGGACACCATGGTTGAGATCCGTAAGAATCGTCGTGAAGAGAGTTTGTTGAAAAAGAGGCGTGAGGGCCTTCAACCTCAGCAGATTCCTTCCTCTCTTCACTCTGTCGTTGTAGAGAAAAAGTTGGAACATTTACCATCCATGGTTGCTGGTGTTTGGAGTGATGATAATAGCTTGCAGCTTGAGGCAACAACTCAGTTTCGAAAGCTGCTTTCTATTGAACGTACTCCACCGATTGAGGAGGTTATACAGACTGGTGTAGTGTCTCGTTTTGTGGAATTTTTGATGAGGGAAGACTTTCCGCAGTTGCAGTTTGAGGCAGCTTGGGCTTTGACAAATATTGCTTCTGGAACTTCTGAAAACACAAAGGTGGTAATTGAACATGGAGCTGTCCCAATTTTTGTTAAGCTCCTTGCTTCTCCTAGTGATGATGTCCGTGAACAGGCTGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGATGTCGCGATCTTGTTCTCGGTCACGGGGCTTTGGTTCCTCTTTTGGCACAACTGAATGAACATGCCAAGCTTTCTATGCTGAGAAATGCTACCTGGACACTTTCGAACTTCTGCAGGGGGAAGCCACAGCCTCCTTTTGATCAGGTTAAACCTGCACTTCCTGCTCTTACTGGTCTTATTCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGCTGGGCACTTTCATATCTTTCTGATGGTACAAATGATAAAATTCAAGCTGTCATTGAAGCTGGTGTTTGTCCTCGACTAGTTGAGCTTCTACTGCACCCATCTCCTTCAGTGCTAATTCCTGCTCTTCGTACTGTTGGAAATATTGTTACTGGAGATGATATGCAAACTCAGGTTATCATCAATCATCAGGCTCTTCCTTGCCTATTCAATCTGTTGACCAATAATTATAAAAAAAGCATCAAGAAGGAAGCTTGTTGGACCATATCAAACATCACAGCCGGGAATAAACAGCAGATTCAGGCTGTTATTGAGGCCAATATATTTGGTCCTTTGGTGAACCTGCTCCAAAATGCTGAGTTTGATATTAAGAAAGAGGCTGCCTGGGCTATCTCAAATGCTACATCTGGTGGATCTCATGACCAAATCAAGTATCTAGTAAGTCAAGGGTGTATTAAGCCCTTGTGTGATCTTCTTATCTGCCCTGATCCTAGGATTGTGACAGTTTGTCTGGAAGGCCTTGAAAACATCTTAAAGGTTGGAGAAGCTGATAAAAATATAGGCAATACTGGTGACGTGAATCTATATGCCCAAATGATCGATGATGCTGAGGGATTGGAGAAAATTGAGAATCTCCAGAGTCATGACAACACTGAGATTTATGAAAAGGCTGTAAAGATTCTTGAGACATACTGGTTGGAGGAAGATGATGAGACTATGCCTCCAGGGGATGCTGCTCAATCAGGATTCAACTTTGGAAGTGCTGAGGTTCCTTCCGTGCCTTCCGGTGGATTCAACTTCACTCAGTAG 1602 0.4444 MSYRPSANSRTDVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLLKKRREGLQPQQIPSSLHSVVVEKKLEHLPSMVAGVWSDDNSLQLEATTQFRKLLSIERTPPIEEVIQTGVVSRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALVPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALTGLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQVIINHQALPCLFNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANIFGPLVNLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNIGNTGDVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDETMPPGDAAQSGFNFGSAEVPSVPSGGFNFTQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00591 533 PANTHER IMPORTIN ALPHA 3 522 - -
Car04g00591 533 Pfam Atypical Arm repeat 458 504 IPR032413 -
Car04g00591 533 SUPERFAMILY ARM repeat 15 501 IPR016024 -
Car04g00591 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Car04g00591 533 Gene3D - 74 497 IPR011989 -
Car04g00591 533 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Car04g00591 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 275 315 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 317 358 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 360 400 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 403 443 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 234 273 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 190 232 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 149 189 IPR000225 GO:0005515
Car04g00591 533 SMART arm_5 106 147 IPR000225 GO:0005515
Car04g00591 533 Gene3D - 13 52 IPR036975 GO:0006606
Car04g00591 533 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Car04g00591 533 Pfam Armadillo/beta-catenin-like repeat 108 147 IPR000225 GO:0005515
Car04g00591 533 PIRSF Importin_alpha 5 531 IPR024931 GO:0005737|GO:0006606|GO:0061608
Car04g00591 533 MobiDBLite consensus disorder prediction 501 533 - -
Car04g00591 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Car04g00591 533 PANTHER IMPORTIN SUBUNIT ALPHA 3 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00591 Car-Chr4 5892136 5897040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00591 138 337 U-box Gene Family AT1G71020 23.881 5.69e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00591 K15042 - gmx:100789135 1003.05