Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00588 atggcgacagagccagctttgccattctcaattgtatctgttgttgaagatgttcttcaaaaacacggaagccgattaagcgacatagatttagcgtcaagaaaggccgaagaagcttcatcaagaaggaatgaagcagctaggtggctgcgaaacacagttggaaatgttggaggaaaagacatgttagctgaaccttctgaagaagattttaggattgcattgcgtagtggaattatcctttgcaatgctctcaacaaaattcagcccggtgctgttcctaaagtagttgaagcccccagtgacattgataatgttcctgatcgagcagctctatctatttatcaatactttgaaaatgtaagaaattttcttgtaactgtggaggagatggggcttccaacatttgaagcttctgatttggaacagggagggaaatcttcaaggatagtgaattgtgttttagcacttaaatcatatagtgaatggaaactgggaggcaaaaatggattgtggaaatatggtgggaatccaaaaccacctacctttgtgaaaccaattatgagaaaaaactcaggaccattcatgaggtctttggccagagctgtgtctttaggcgacaaagatagtttgctgagtgatcaatcctcaagcaatgatgctgtactgcatgatcgcagtgaagggggttctattccttccttgtattcactagttcgtgaaattttgcatgataagaagcaagaagaaattcccattatagtggaatctctgcttagcaaagtcatggaggagtttgaaagtcgcgtgatcatagtacaacaagaaacgcctaaaacacctcgagaagataaggcatcatctaaagccgggaattcaaatttagaagctattagtgatgaagaagagagggaagaaaatgaagatgtagatatcaaacagaagcaaaatcatgatgtgaagtacaatggagacgaggaatcaagaagccggattttgaagcagcaaaccataattcaaaagcaaagtgaaaacatccaggaattgaaagtgattgttcatcaaacaaaagaaggaatgcactgtctacataagaaatacagggaggatttcatcaatctaggtaagcatctgcgtagcctagcttcttctgcttcaggatatcagaaagttctagaagaaaaccgcaagttatacaatcagatgcaagacttgaaaggaaatattagggtgtactgtagagttcgccccttagtaggacaaccaaacaatcccggcattattcgtaatgtagaggaagatagtatttcactcataatggcttctaagaatgggaaagaagtgaagaagacatttacttttaacaaagtgtttggtccttctgcaactcaaggggaggttttctcagatacccaacctctgattcgttcagttttggatggcttcaatgtttgtatatttgcctatggccagacgggatcgggaaaaacacacactatgtctggaccaaacaatcttaccgaggaaacagtcggtgtcaactaccgtgcactgagggatcttttctatctctcagaacaaaggaaagagaccattcactatgatatctctgtgcagatgcttgagatatacaatgagcaagttagagacctactaatgacagagacttctaacaaaagattagaaattcgcaacagttcccataataatggtattaacgtgccagacgcaaaccttgttcctgtttcatccactgctgatgtcttaaatttgatgaatttgggacaaaagaatcgggcagttagtgctactgccatgaatgatcgaagtagtcgttctcatagctgcttgacagttcatgttcaaggaagagagcttacatcaggaaatagtcttcgtggatgtatccacctagttgatttggcaggaagtgagagggttgataaatctgaggttataggagataggctaaaggaggctcaacatattaacaagtcgctttctgctttaggagatgtaattgcttccctggcccaaaagcaatcgcatgttccctatagaaacagtaaacttactcagttgcttcaggactctcttggaggccaagctaagacactcatgtttgttcatattagcccggagcctgaagctcttggagaatcaattagtacactgaagtttgctgaaagggtctccactatcgaacttggtgctgcacgagttaataaagatagcggtgaagtcaaagagttgaaggaacagattgctagtctaaaggcaaccttagcgagggtgaaggatggagagttggaacactttaaacagcctgcaaatagcatcactgactcgcCGAGGTCGAAATCTCAATTGTCGTCCATTGTACCAGCTAACTGGACTTCTGGAAGTCGTAAGCTACCAAGAGACGATTCTAGTGGCATTGAGGGTTCTAAAAAGGCTGCACCCAAGCTGAAAAGGCGAAGCCTTGATCCCGAAGAGATATATACAAGTTTACCTACATGGCCACATCCTCGTGCTGGGGTAAACGGAAACGATGATGATAAAGAATCAGTTTCTGGGAATTGGAATAGTAGAAGCATGAATAGGGATGAGAACCTAACAACTGATGAGAGCGTCACGGGACAGTCAGAAGTAGAAAGCAAACAGTCGTATTCTCCATTGTTAAGTGTGGAGGTGGCCACCACATTCACAAATGACTCTGATGAGCTTGAGTTAACAACTAGTGAATGTTCAGAACCAGACATGAATTGGCAATCCCATTTACCGAAAACAACCGCCATTTCCAATGTATTAGCGTCTAGACCAAATAAATCAACTCATTATAAACAAGCAAAGAACTTAGAAACCAGGAGTATGATCTCATCGTCAACAAGGAAACAACCTAACTTAGTTAGTCAATCAAGAAAGCATTCAGGATCAATTGATGCTAAAAGAAGAAGTGGAAATGCCAAGTGA 2973 0.0875 MATEPALPFSIVSVVEDVLQKHGSRLSDIDLASRKAEEASSRRNEAARWLRNTVGNVGGKDMLAEPSEEDFRIALRSGIILCNALNKIQPGAVPKVVEAPSDIDNVPDRAALSIYQYFENVRNFLVTVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKLGGKNGLWKYGGNPKPPTFVKPIMRKNSGPFMRSLARAVSLGDKDSLLSDQSSSNDAVLHDRSEGGSIPSLYSLVREILHDKKQEEIPIIVESLLSKVMEEFESRVIIVQQETPKTPREDKASSKAGNSNLEAISDEEEREENEDVDIKQKQNHDVKYNGDEESRSRILKQQTIIQKQSENIQELKVIVHQTKEGMHCLHKKYREDFINLGKHLRSLASSASGYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLVGQPNNPGIIRNVEEDSISLIMASKNGKEVKKTFTFNKVFGPSATQGEVFSDTQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPNNLTEETVGVNYRALRDLFYLSEQRKETIHYDISVQMLEIYNEQVRDLLMTETSNKRLEIRNSSHNNGINVPDANLVPVSSTADVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGESISTLKFAERVSTIELGAARVNKDSGEVKELKEQIASLKATLARVKDGELEHFKQPANSITDSPRSKSQLSSIVPANWTSGSRKLPRDDSSGIEGSKKAAPKLKRRSLDPEEIYTSLPTWPHPRAGVNGNDDDKESVSGNWNSRSMNRDENLTTDESVTGQSEVESKQSYSPLLSVEVATTFTNDSDELELTTSECSEPDMNWQSHLPKTTAISNVLASRPNKSTHYKQAKNLETRSMISSSTRKQPNLVSQSRKHSGSIDAKRRSGNAK 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00588 990 MobiDBLite consensus disorder prediction 937 990 - -
Car04g00588 990 MobiDBLite consensus disorder prediction 308 328 - -
Car04g00588 990 SMART ch_5 42 160 IPR001715 GO:0005515
Car04g00588 990 SUPERFAMILY Calponin-homology domain, CH-domain 44 177 IPR036872 -
Car04g00588 990 ProSiteProfiles Kinesin motor domain profile. 408 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 MobiDBLite consensus disorder prediction 774 890 - -
Car04g00588 990 MobiDBLite consensus disorder prediction 853 890 - -
Car04g00588 990 MobiDBLite consensus disorder prediction 807 831 - -
Car04g00588 990 Gene3D - 32 162 IPR036872 -
Car04g00588 990 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 976 - -
Car04g00588 990 PRINTS Kinesin heavy chain signature 481 502 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 PRINTS Kinesin heavy chain signature 604 621 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 PRINTS Kinesin heavy chain signature 635 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 PRINTS Kinesin heavy chain signature 684 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 766 IPR027417 -
Car04g00588 990 CDD KISc_C_terminal 406 736 - -
Car04g00588 990 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Car04g00588 990 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 976 - -
Car04g00588 990 MobiDBLite consensus disorder prediction 275 328 - -
Car04g00588 990 Pfam Kinesin motor domain 414 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 SMART kinesin_4 406 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00588 990 MobiDBLite consensus disorder prediction 937 976 - -
Car04g00588 990 Coils Coil 388 408 - -
Car04g00588 990 MobiDBLite consensus disorder prediction 776 806 - -
Car04g00588 990 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Car04g00588 990 Gene3D Kinesin motor domain 349 736 IPR036961 -
Car04g00588 990 Coils Coil 741 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00588 Car-Chr4 5869859 5876366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00588 396 734 Calmodulin-binding Proteins AT5G65930 41.983 2.07e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00588 K10406 - gmx:100808197 1295.03