Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00587 ATGAGTGCAATACCGCAAGGTATAAGCAGGGATGAATGGCTTCAAGCTCTGCCTCGGGCTCTAGTTGTTAGTTTTTTGAAAACTGACATGGAATTTCAGCAACAAGGGGAAACCTCTGGAACAACAGCTACATTTGTTATTATTGATGGATGGACTGTTACAGTTGCATCTGTTGGGGATTCCCGATGCATATTAGATACCCAGGGAGGTGCTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTGGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCGATTGGTGACACAGACGTGGGAGAATATATTGTTCCAATACCACATGTTAAACAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTGTCTTCTGATATGGCTGCCAAGTCATGCCGGGGTGTATCTGCAGAACTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGACGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGATTATCCTTTGTCACCAATGACAACAACTCTTAGAAAAAAACATAATATGCTAAGTTCACTTCTCTTTGGAAAGAAATCTCAAAACACTACAAACAAAGGAACTAATAAGCTTTCTGCAATTGGTGTTGTAGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGCTGGGTAAGGATGTTCCTTCCAATATGAATTCTGGTATTTTCCGCTGTGCGGTTTGCCTAGCAGACCAACCCTCTAGTGATGGTTTATCAGCGAACACCGATCATATTATCACTCCAGTTTCTAAGCCATGGGAAGGTCCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCGTGA 996 0.4357 MSAIPQGISRDEWLQALPRALVVSFLKTDMEFQQQGETSGTTATFVIIDGWTVTVASVGDSRCILDTQGGAVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGVSAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDYPLSPMTTTLRKKHNMLSSLLFGKKSQNTTNKGTNKLSAIGVVEELFEEGSAMLTERLGKDVPSNMNSGIFRCAVCLADQPSSDGLSANTDHIITPVSKPWEGPFLCTNCQKKKDAMEGKRS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00587 331 CDD PP2Cc 9 205 IPR001932 -
Car04g00587 331 SMART PP2C_4 1 203 IPR001932 -
Car04g00587 331 Pfam Protein phosphatase 2C 16 190 IPR001932 -
Car04g00587 331 SUPERFAMILY PP2C-like 12 205 IPR036457 -
Car04g00587 331 Gene3D - 2 209 IPR036457 -
Car04g00587 331 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 1 331 - -
Car04g00587 331 PANTHER ALPHABET, ISOFORM E-RELATED 1 331 - -
Car04g00587 331 ProSiteProfiles PPM-type phosphatase domain profile. 1 205 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00587 Car-Chr4 5857884 5861238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00587 1 330 PP2C-type Phosphatase Gene Family AT1G09160 76.737 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00587 - - gmx:100794630 568.54