Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00577 ATGATAGAGGAAAAATCACAAAAGAGGACGAGAATCGTCATAATTGGAATGTCAACCTTTTTACTAGTGGCTATGGTGGTTGCCGTTACGGTTAGTGTAGACATTAATACTCGCAACGATGATTCAACGAACAACAATGATAAGACTCGCATAGCTTCAACCATAAAATCGGTGAAAAGTTTTTGTCAACCGACCGATTACAAAAAAGAATGTGAGGAAAACCTAATAGAAATAGCCGGCAACACAACGGAACCAAGAGAACTCATTAAATTAGCCTTCAATGTCACCATTAAAAAAATAGGTGATGGAATAAAGAAAACCAATCTCTTGCATGAAGTGGAGAAGGAGCCAAGGGCAAAATTGGCACTTGACACATGCAAACAACTTATGGATCTTTCAATTGGTGAATTTGAAAGGTCACTTGAGGGAATAAAAACTTTTGATCTCAACAATTTAGAAAATATCCTTGTGAGTTTAAAGGTTTGGCTAAGTGGTGCAATTACATATCAAGAAACTTGTTTAGATGGTTTTCAAAACACAACTAGCGATGCTAGTAAGAAAATGCAAAATATTTTAACAACATCAATGCATATGAGTAGTAATGCACTTGCCATAATTTCGGATTTGGCAAAAAGTGTGTTGGATTTGAATTTGACAAACAATGAACGTCGTCTTATTGataataataataataataataataataataataatGATGTGGGCGAACAAGTTTTTGGTCACGATGATGTTGAGGTTCCATCTTGGGCTGGTGATGGTTCAAGTGTTGGTGTTCGTAGACTCCTTCATGCAAATCATTATAAACTTAAGGCTAATGTGATTGTGGCTAAAGATGGTAGTGGAAAGTTTAAGAAAATTAACGATGCTTTAAAGCATGTGCCAAAGAAGAACAAAAAAATATTTGTTATTTATATTAAGGAAGGTGTTTATCATGAATATGTTGAAGTTACAAAGAAAATGACTCATGTTGTGTTTGTTGGTGATGGTGGCAACAAGACACGAATTACTGGTAACAAAAATTTCATAGATGGGGTTAACACTTATAAAACCCCCACCGTTGCTATTGCTGGAGATTACTTTGTCGCCATCAATATAGGATTTGAGAATTCAGCTGGACCCCAAAAACATCAAGCAGTAGCCATAAGAGTTCAAGCTGATAAATCAATCTTTTACAAATGTTCAATAGACGGATATCAAGATACATTATACGCACATACCATGCGTCAATTTTATCGTGATTGTACAATTTCAGGTACCATTGACTTTGTCTTTGGTGACGCAGTGGCTATTTTTCAAAATTGCACTTTTGTTGTAAGAAAACCATTAGAAAACCAACAATGCATCGTGACCGCACAAGGTAGAAAGGACAAACATCAACCATCAGGAATAGTGATTCAAGGTTGTTCCATTGTGTCTGATACTCACAATGTGAAGTTTGACAACAAAGCCTATCTCGCTCGTCCGTGGAAGAATTATTCAAGAACAATTTTCATGAAAACTTACATTGGAGATTTGATTGAGCCTGATGGATATATGCCATGGCAATTACCAAATGGTACTCTTACTGGAATGGATACTTGTTTTTATGTTGAGTATAAGAATAAAGGTCCTGGTTCAAATAAATCAAAGCGTGTAAAATGGCGTGGAATCAAGAATCTTACATCACATACTGCTAGTGTTTTCTTACCATATAAATTCTTTCATGGTGATGATTGGATTAAAGTAACTAGAGTTCCTTACTCTTCTGGAGAGATATCCTCCAAACACTAA 1788 0.3535 MIEEKSQKRTRIVIIGMSTFLLVAMVVAVTVSVDINTRNDDSTNNNDKTRIASTIKSVKSFCQPTDYKKECEENLIEIAGNTTEPRELIKLAFNVTIKKIGDGIKKTNLLHEVEKEPRAKLALDTCKQLMDLSIGEFERSLEGIKTFDLNNLENILVSLKVWLSGAITYQETCLDGFQNTTSDASKKMQNILTTSMHMSSNALAIISDLAKSVLDLNLTNNERRLIDNNNNNNNNNNNDVGEQVFGHDDVEVPSWAGDGSSVGVRRLLHANHYKLKANVIVAKDGSGKFKKINDALKHVPKKNKKIFVIYIKEGVYHEYVEVTKKMTHVVFVGDGGNKTRITGNKNFIDGVNTYKTPTVAIAGDYFVAINIGFENSAGPQKHQAVAIRVQADKSIFYKCSIDGYQDTLYAHTMRQFYRDCTISGTIDFVFGDAVAIFQNCTFVVRKPLENQQCIVTAQGRKDKHQPSGIVIQGCSIVSDTHNVKFDNKAYLARPWKNYSRTIFMKTYIGDLIEPDGYMPWQLPNGTLTGMDTCFYVEYKNKGPGSNKSKRVKWRGIKNLTSHTASVFLPYKFFHGDDWIKVTRVPYSSGEISSKH 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00577 595 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Car04g00577 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 211 IPR035513 -
Car04g00577 595 Pfam Pectinesterase 278 576 IPR000070 GO:0030599|GO:0042545
Car04g00577 595 PANTHER PECTINESTERASE 11 591 - -
Car04g00577 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Car04g00577 595 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 209 IPR006501 GO:0004857
Car04g00577 595 Gene3D - 275 591 IPR012334 -
Car04g00577 595 PANTHER PECTINESTERASE 11 591 - -
Car04g00577 595 CDD PMEI-like_3 60 211 - -
Car04g00577 595 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Car04g00577 595 SUPERFAMILY Pectin lyase-like 276 588 IPR011050 -
Car04g00577 595 SMART PMEI_2 53 205 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00577 Car-Chr4 5775406 5777296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00577 3 592 Carbohydrate Esterase AT3G05610 47.563 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00577 K01051 - gmx:100794799 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02940 03 74647061 74649573 Car04g00577 04 5775406 5777296 PCT